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  1. The nuclear DNA is conventionally used to assess the diversity and relatedness among different species, but variations at the DNA genome level has also been used to study the relationship among different organ...

    Authors: Tariq Pervaiz, Xin Sun, Yanyi Zhang, Ran Tao, Junhuan Zhang and Jinggui Fang
    Citation: BMC Plant Biology 2015 15:4
  2. Leaf red coloration is an important characteristic in many plant species, including cultivars of ornamental peach (Prunus persica). Peach leaf color is controlled by a single Gr gene on linkage group 6, with a re...

    Authors: Ying Zhou, Hui Zhou, Kui Lin-Wang, Sornkanok Vimolmangkang, Richard V Espley, Lu Wang, Andrew C Allan and Yuepeng Han
    Citation: BMC Plant Biology 2014 14:388
  3. The protection of canola (Brassica napus) crops against blackleg disease, caused by the fungal pathogen Leptosphaeria maculans, is largely mediated by race-specific resistance genes (R-genes). While many R-genes ...

    Authors: Nicholas J Larkan, Derek J Lydiate, Fengqun Yu, S Roger Rimmer and M Hossein Borhan
    Citation: BMC Plant Biology 2014 14:387
  4. Exocytosis is integral to root growth: trafficking components of systems that control growth (e.g., PIN auxin transport proteins) to the plasma membrane, and secreting materials that expand the cell wall to th...

    Authors: Rex A Cole, Samantha A McInally and John E Fowler
    Citation: BMC Plant Biology 2014 14:386
  5. Apple fruit mealiness is one of the most important textural problems that results from an undesirable ripening process during storage. This phenotype is characterized by textural deterioration described as sof...

    Authors: Sandrine Mikol Segonne, Maryline Bruneau, Jean-Marc Celton, Sophie Le Gall, Mathilde Francin-Allami, Marjorie Juchaux, François Laurens, Mathilde Orsel and Jean-Pierre Renou
    Citation: BMC Plant Biology 2014 14:375
  6. Agriculture is facing enormous challenges to feed a growing population in the face of rapidly evolving pests and pathogens. The rusts, in particular, are a major pathogen of cereal crops with the potential to ...

    Authors: Xuemin Wang, Emma Mace, Colleen Hunt, Alan Cruickshank, Robert Henzell, Heidi Parkes and David Jordan
    Citation: BMC Plant Biology 2014 14:366
  7. Small GTPases are monomeric guanine nucleotide-binding proteins. In plants, ROPs regulate plant cell polarity, plant cell differentiation and development as well as biotic and abiotic stress signaling pathways.

    Authors: Zhiwei Zhang, Fan Yang, Ren Na, Xiaoluo Zhang, Shuqing Yang, Jing Gao, Mingshou Fan, Yan Zhao and Jun Zhao
    Citation: BMC Plant Biology 2014 14:392
  8. Nitrogen is an important nutrient, often limiting plant productivity and yield. In poplars, woody crops used as feedstock for renewable resources and bioenergy, nitrogen fertilization accelerates growth of the...

    Authors: Dejuan Euring, Hua Bai, Dennis Janz and Andrea Polle
    Citation: BMC Plant Biology 2014 14:391
  9. Male sterility is a common phenomenon in flowering plant species, and it has been successfully developed in several crops by taking advantage of heterosis. Using space mutation breeding of upland cotton, a nov...

    Authors: Ji Liu, Chaoyou Pang, Hengling Wei, Meizhen Song, Yanyan Meng, Shuli Fan and Shuxun Yu
    Citation: BMC Plant Biology 2014 14:390
  10. Programmed cell death (PCD) is an important process for the development and maintenance of multicellular eukaryotes. In animals, there are three morphologically distinct cell death types: apoptosis, autophagic...

    Authors: Adrian N Dauphinee, Trevor S Warner and Arunika HLAN Gunawardena
    Citation: BMC Plant Biology 2014 14:389
  11. Centromeric DNA sequences alone are neither necessary nor sufficient for centromere specification. The centromere specific histone, CenH3, evolves rapidly in many species, perhaps as a coevolutionary response to ...

    Authors: Rick E Masonbrink, Joseph P Gallagher, Josef J Jareczek, Simon Renny-Byfield, Corrinne E Grover, Lei Gong and Jonathan F Wendel
    Citation: BMC Plant Biology 2014 14:383
  12. Recently we showed that de novo expression of a turtle riboflavin-binding protein (RfBP) in transgenic Arabidopsis increased H2O2 concentrations inside leaf cells, enhanced the expression of floral regulatory gen...

    Authors: Liang Li, Li Hu, Li-Ping Han, Hongtao Ji, Yueyue Zhu, Xiaobing Wang, Jun Ge, Manyu Xu, Dan Shen and Hansong Dong
    Citation: BMC Plant Biology 2014 14:381
  13. Western white pine (WWP, Pinus monticola Douglas ex D. Don) is of high interest in forest breeding and conservation because of its high susceptibility to the invasive disease white pine blister rust (WPBR, caused...

    Authors: Jun-Jun Liu, Richard A Sniezko, Rona N Sturrock and Hao Chen
    Citation: BMC Plant Biology 2014 14:380
  14. The adult plant stem rust resistance gene Sr2 was introgressed into hexaploid wheat cultivar (cv) Marquis from tetraploid emmer wheat cv Yaroslav, to generate stem rust resistant cv Hope in the 1920s. Subsequentl...

    Authors: Rohit Mago, Linda Tabe, Sonia Vautrin, Hana Šimková, Marie Kubaláková, Narayana Upadhyaya, Hélène Berges, Xiuying Kong, James Breen, Jaroslav Doležel, Rudi Appels, Jeffrey G Ellis and Wolfgang Spielmeyer
    Citation: BMC Plant Biology 2014 14:379
  15. Resistance to Fusarium ear rot of maize is a quantitative and complex trait. Marker-trait associations to date have had small additive effects and were inconsistent between previous studies, likely due to the ...

    Authors: Charles T Zila, Funda Ogut, Maria C Romay, Candice A Gardner, Edward S Buckler and James B Holland
    Citation: BMC Plant Biology 2014 14:372
  16. Adventitious rooting is an organogenic process by which roots are induced from differentiated cells other than those specified to develop roots. In forest tree species, age and maturation are barriers to adven...

    Authors: Dolores Abarca, Alberto Pizarro, Inmaculada Hernández, Conchi Sánchez, Silvia P Solana, Alicia del Amo, Elena Carneros and Carmen Díaz-Sala
    Citation: BMC Plant Biology 2014 14:354
  17. The end-use quality of wheat flour varies as a result of the growth conditions of the plant. Among the wheat gluten proteins, the omega-5 gliadins have been identified as a major source of environmental variab...

    Authors: Susan B Altenbach, Charlene K Tanaka and Bradford W Seabourn
    Citation: BMC Plant Biology 2014 14:393
  18. Lipophilic antioxidants play dual key roles in edible seeds (i) as preservatives of cell integrity and seed viability by preventing the oxidation of fats, and (ii) as essential nutrients for human and animal l...

    Authors: Beatriz Fernández-Marín, Rubén Milla, Nieves Martín-Robles, Erwann Arc, Ilse Kranner, José María Becerril and José Ignacio García-Plazaola
    Citation: BMC Plant Biology 2014 14:1599
  19. Barley is an important cereal crop cultivated for malt and ruminant feed and in certain regions it is used for human consumption. It is vulnerable to numerous foliar diseases including barley leaf rust caused ...

    Authors: Peter M Dracatos, Mehar S Khatkar, Davinder Singh and Robert F Park
    Citation: BMC Plant Biology 2014 14:1598
  20. The oil palm (Elaeis guineensis, 2n = 32) has the highest oil yield of any crop species, as well as comprising the richest dietary source of provitamin A. For the tropical species, the best mean growth temperatur...

    Authors: Yong Xiao, Lixia Zhou, Wei Xia, Annaliese S Mason, Yaodong Yang, Zilong Ma and Ming Peng
    Citation: BMC Plant Biology 2014 14:384
  21. Grass pea (Lathyrus sativus L.) is a valuable resource for potentially durable partial resistance to rust. To gain insight into the resistance mechanism and identify potential resistance genes, we generated the f...

    Authors: Nuno Felipe Almeida, Susana Trindade Leitão, Nicolas Krezdorn, Björn Rotter, Peter Winter, Diego Rubiales and Maria Carlota Vaz Patto
    Citation: BMC Plant Biology 2014 14:376
  22. Plant perception of conserved microbe-derived or damage-derived molecules (so-called microbe- or damage-associated molecular patterns, MAMPs or DAMPs, respectively) triggers cellular signaling cascades to init...

    Authors: Stefanie Ranf, Lennart Eschen-Lippold, Katja Fröhlich, Lore Westphal, Dierk Scheel and Justin Lee
    Citation: BMC Plant Biology 2014 14:374
  23. GRAS proteins belong to a plant transcription factor family that is involved with multifarious roles in plants. Although previous studies of this protein family have been reported for Arabidopsis, rice, Chinese c...

    Authors: Ningning Wu, Yan Zhu, Wanlu Song, Yaxuan Li, Yueming Yan and Yingkao Hu
    Citation: BMC Plant Biology 2014 14:373
  24. The development of genome-wide association studies (GWAS) in crops has made it possible to mine interesting alleles hidden in gene bank resources. However, only a small fraction of the rice genetic diversity o...

    Authors: Nhung Thi Phuong Phung, Chung Duc Mai, Pierre Mournet, Julien Frouin, Gaëtan Droc, Nhung Kim Ta, Stefan Jouannic, Loan Thi Lê, Vinh Nang Do, Pascal Gantet and Brigitte Courtois
    Citation: BMC Plant Biology 2014 14:371
  25. Grapevine berry, a nonclimacteric fruit, has three developmental stages; the last one is when berry color and sugar increase. Flavors derived from terpenoid and fatty acid metabolism develop at the very end of...

    Authors: Grant R Cramer, Ryan Ghan, Karen A Schlauch, Richard L Tillett, Hildegarde Heymann, Alberto Ferrarini, Massimo Delledonne, Sara Zenoni, Marianna Fasoli and Mario Pezzotti
    Citation: BMC Plant Biology 2014 14:370
  26. During wheat senescence, leaf components are degraded in a coordinated manner, releasing amino acids and micronutrients which are subsequently transported to the developing grain. We have previously shown that...

    Authors: Stephen Pearce, Facundo Tabbita, Dario Cantu, Vince Buffalo, Raz Avni, Hans Vazquez-Gross, Rongrong Zhao, Christopher J Conley, Assaf Distelfeld and Jorge Dubcovksy
    Citation: BMC Plant Biology 2014 14:368
  27. Low-molecular-weight glutenin subunits (LMW-GS), encoded by Glu-3 complex loci in hexaploid wheat, play important roles in the processing quality of wheat flour. To date, the molecular characteristics and effects...

    Authors: Shoumin Zhen, Caixia Han, Chaoying Ma, Aiqin Gu, Ming Zhang, Xixi Shen, Xiaohui Li and Yueming Yan
    Citation: BMC Plant Biology 2014 14:367
  28. Transcriptional enhancers are able to increase transcription from heterologous promoters when placed upstream, downstream and in either orientation, relative to the promoter. Transcriptional enhancers have bee...

    Authors: John P Davies, Vaka Reddy, Xing L Liu, Avutu S Reddy, William Michael Ainley, Mark Thompson, Lakshmi Sastry-Dent, Zehui Cao, James Connell, Delkin O Gonzalez and Douglas Ry Wagner
    Citation: BMC Plant Biology 2014 14:359
  29. The formation and development of bulblets are crucial to the Lilium genus since these processes are closely related to carbohydrate metabolism, especially to starch and sucrose metabolism. However, little is know...

    Authors: XueYan Li, ChunXia Wang, JinYun Cheng, Jing Zhang, Jaime A Teixeira da Silva, XiaoYu Liu, Xin Duan, TianLai Li and HongMei Sun
    Citation: BMC Plant Biology 2014 14:358
  30. Availability of the draft nuclear genome sequences of small-seeded desi-type legume crop Cicer arietinum has provided an opportunity for investigating unique chickpea genomic features and evaluation of their biol...

    Authors: Gopal Misra, Piyush Priya, Nitesh Bandhiwal, Neha Bareja, Mukesh Jain, Sabhyata Bhatia, Debasis Chattopadhyay, Akhilesh K Tyagi and Gitanjali Yadav
    Citation: BMC Plant Biology 2014 14:315
  31. Light is one of the most significant environmental factors affecting to the accumulation of flavonoids in fruits. The composition of the light spectrum has been shown to affect the production of phenolic compo...

    Authors: Laura Zoratti, Marian Sarala, Elisabete Carvalho, Katja Karppinen, Stefan Martens, Lara Giongo, Hely Häggman and Laura Jaakola
    Citation: BMC Plant Biology 2014 14:377
  32. The RAD21 cohesin plays, besides its well-recognised role in chromatid cohesion, a role in DNA double strand break (dsb) repair. In Arabidopsis there are three RAD21 paralog genes (AtRAD21.1, AtRAD21.2 and AtRAD2...

    Authors: José A da Costa-Nunes, Cláudio Capitão, Jaroslav Kozak, Pedro Costa-Nunes, Gloria M Ducasa, Olga Pontes and Karel J Angelis
    Citation: BMC Plant Biology 2014 14:353
  33. The traditional Chinese medicinal plants Lycium barbarum L. and L. ruthenicum Murr. are valued for the abundance of bioactive carotenoids and anthocyanins in their fruits, respectively. However, the cellular and ...

    Authors: Yongliang Liu, Shaohua Zeng, Wei Sun, Min Wu, Weiming Hu, Xiaofei Shen and Ying Wang
    Citation: BMC Plant Biology 2014 14:269
  34. The tea plant (Camellia sinensis (L.) O. Kuntze) is one of the most economically important woody crops. Recently, many leaf color genotypes have been developed during tea plant breeding and have become valuable m...

    Authors: Lu Wang, Chuan Yue, Hongli Cao, Yanhua Zhou, Jianming Zeng, Yajun Yang and Xinchao Wang
    Citation: BMC Plant Biology 2014 14:352
  35. Fruit maturation and ripening are genetically regulated processes that involve a complex interplay of plant hormones, growth regulators and multiple biological and environmental factors. Tomato (Solanum lycopersi...

    Authors: Nana Ma, Hailong Feng, Xia Meng, Dong Li, Dongyue Yang, Changai Wu and Qingwei Meng
    Citation: BMC Plant Biology 2014 14:351
  36. Eggplant is a powerful source of polyphenols which seems to play a key role in the prevention of several human diseases, such as cancer and diabetes. Chlorogenic acid is the polyphenol most present in eggplant...

    Authors: Pietro Gramazio, Jaime Prohens, Mariola Plazas, Isabel Andújar, Francisco Javier Herraiz, Elena Castillo, Sandra Knapp, Rachel S Meyer and Santiago Vilanova
    Citation: BMC Plant Biology 2014 14:350
  37. In plants, the growth of an aerial organ to its characteristic size relies on the coordination of cell proliferation and expansion. These two different processes occur successively during organ development, wi...

    Authors: Zhixiang Qin, Xiao Zhang, Xiaoran Zhang, Guanping Feng and Yuxin Hu
    Citation: BMC Plant Biology 2014 14:349
  38. Over the last years reference genome sequences of several economically and scientifically important cereals and model plants became available. Despite the agricultural significance of these crops only a small ...

    Authors: Thomas Nussbaumer, Karl G Kugler, Wolfgang Schweiger, Kai C Bader, Heidrun Gundlach, Manuel Spannagl, Naser Poursarebani, Matthias Pfeifer and Klaus FX Mayer
    Citation: BMC Plant Biology 2014 14:348
  39. Flavonoid 3′,5′-hydroxylase (F3′5′H), an important branch point enzyme in tea plant flavan-3-ol synthesis, belongs to the CYP75A subfamily and catalyzes the conversion of flavones, flavanones, dihydroflavonols...

    Authors: Yun-Sheng Wang, Yu-Jiao Xu, Li-Ping Gao, Oliver Yu, Xin-Zhen Wang, Xiu-Juan He, Xiao-Lan Jiang, Ya-Jun Liu and Tao Xia
    Citation: BMC Plant Biology 2014 14:347
  40. The safe use of stacked transgenic crops in agriculture requires their environmental and health risk assessment, through which unintended adverse effects are examined prior to their release in the environment....

    Authors: Sarah Zanon Agapito-Tenfen, Vinicius Vilperte, Rafael Fonseca Benevenuto, Carina Macagnan Rover, Terje Ingemar Traavik and Rubens Onofre Nodari
    Citation: BMC Plant Biology 2014 14:346
  41. Mitogen-activated protein kinase (MAPK) cascades play a crucial role in plant growth and development as well as biotic and abiotic stress responses. Knowledge about the MAPK gene family in cotton is limited, a...

    Authors: Xueying Zhang, Liman Wang, Xiaoyang Xu, Caiping Cai and Wangzhen Guo
    Citation: BMC Plant Biology 2014 14:345
  42. Engineering of plants with a composition of lignocellulosic biomass that is more suitable for downstream processing is of high interest for next-generation biofuel production. Lignocellulosic biomass contains ...

    Authors: Vibe M Gondolf, Rhea Stoppel, Berit Ebert, Carsten Rautengarten, April JM Liwanag, Dominique Loqué and Henrik V Scheller
    Citation: BMC Plant Biology 2014 14:344
  43. Drought is by far the most important environmental factor contributing to yield losses in crops, including soybeans [Glycine max (L.) Merr.]. To address this problem, a gene that encodes an osmotin-like protein i...

    Authors: Ricardo Luís Mayer Weber, Beatriz Wiebke-Strohm, Christian Bredemeier, Márcia Margis-Pinheiro, Giovani Greigh de Brito, Ciliana Rechenmacher, Paulo Fernando Bertagnolli, Maria Eugênia Lisei de Sá, Magnólia de Araújo Campos, Regina Maria Santos de Amorim, Magda Aparecida Beneventi, Rogério Margis, Maria Fátima Grossi-de-Sa and Maria Helena Bodanese-Zanettini
    Citation: BMC Plant Biology 2014 14:343
  44. Trees belonging to the Casuarinaceae and Betulaceae families play an important ecological role and are useful tools in forestry for degraded land rehabilitation and reforestation. These functions are linked to th...

    Authors: Issa Diédhiou, Alexandre Tromas, Maïmouna Cissoko, Krystelle Gray, Boris Parizot, Amandine Crabos, Nicole Alloisio, Pascale Fournier, Lorena Carro, Sergio Svistoonoff, Hassen Gherbi, Valérie Hocher, Diaga Diouf, Laurent Laplaze and Antony Champion
    Citation: BMC Plant Biology 2014 14:342
  45. Elucidation of genotype-to-phenotype relationships is a major challenge in biology. In plants, it is the basis for molecular breeding. Quantitative Trait Locus (QTL) mapping enables to link variation at the tr...

    Authors: Joachim W Bargsten, Jan-Peter Nap, Gabino F Sanchez-Perez and Aalt DJ van Dijk
    Citation: BMC Plant Biology 2014 14:330
  46. For most organisms, even if their genome sequence is available, little functional information about individual genes or proteins exists. Several annotation pipelines have been developed for functional analysis...

    Authors: David Amar, Itziar Frades, Agnieszka Danek, Tatyana Goldberg, Sanjeev K Sharma, Pete E Hedley, Estelle Proux-Wera, Erik Andreasson, Ron Shamir, Oren Tzfadia and Erik Alexandersson
    Citation: BMC Plant Biology 2014 14:329
  47. Trihelix transcription factor family is plant-specific and plays important roles in developmental processes. However, their function in abiotic stress response is largely unclear.

    Authors: Xiao-Hong Wang, Qing-Tian Li, Hao-Wei Chen, Wan-Ke Zhang, Biao Ma, Shou-Yi Chen and Jin-Song Zhang
    Citation: BMC Plant Biology 2014 14:339
  48. Genome Wide Association Studies (GWAS) have been recently used to dissect complex quantitative traits and identify candidate genes affecting phenotype variation of polygenic traits. In order to map loci contro...

    Authors: Valentino Ruggieri, Gianluca Francese, Adriana Sacco, Antonietta D’Alessandro, Maria Manuela Rigano, Mario Parisi, Marco Milone, Teodoro Cardi, Giuseppe Mennella and Amalia Barone
    Citation: BMC Plant Biology 2014 14:337
  49. Genes involved in arbuscular mycorrhizal (AM) symbiosis have been identified primarily by mutant screens, followed by identification of the mutated genes (forward genetics). In addition, a number of AM-related...

    Authors: Patrick Favre, Laure Bapaume, Eligio Bossolini, Mauro Delorenzi, Laurent Falquet and Didier Reinhardt
    Citation: BMC Plant Biology 2014 14:333
  50. Latex harvesting in Hevea brasiliensis amounts to strong abiotic stress that can cause a halt in production in the most susceptible clones. Although the role of jasmonic acid has been suggested in laticifer diffe...

    Authors: Julien Pirrello, Julie Leclercq, Florence Dessailly, Maryannick Rio, Piyanuch Piyatrakul, Kuswanhadi Kuswanhadi, Chaorong Tang and Pascal Montoro
    Citation: BMC Plant Biology 2014 14:341

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