Daunay MC, Lester RN: Eggplant. Tropical Plant Breeding. Edited by: Charrier A, Jacquot M, Hamon S, Nicolas D. 2001, CIRAD, SciencePublishers Inc, Plymouth, UK, 199-221.
Google Scholar
Hanson PM, Yang R, Tsou S, Ledesma D, Engle L, Lee T: Diversity in eggplant (Solanum melongena) for superoxide scavenging activity, total phenolics, and ascorbic acid. J Food Compos Anal. 2006, 19: 594-600. 10.1016/j.jfca.2006.03.001.
Article
CAS
Google Scholar
Lo Scalzo R, Fibiani M, Mennella G, Rotino GL, Dal Sasso M, Culici M, Spallino A, Braga PC: Thermal treatment of eggplant (Solanum melongena L.) increases the antioxidant content and the inhibitory effect on human neutrophil burst. J Agric Food Chem. 2010, 58: 3371-3379. 10.1021/jf903881s.
Article
CAS
PubMed
Google Scholar
Plazas M, López-Gresa MP, Vilanova S, Torres C, Hurtado M, Gramazio P, Andújar I, Herráiz FJ, Bellés JM, Prohens J: Diversity and relationships in key traits for functional and apparent quality in a collection of eggplant: fruit phenolics content, antioxidant activity, polyphenol oxidase activity, and browning. J Agric Food Chem. 2013, 61: 8871-8879. 10.1021/jf402429k.
Article
CAS
PubMed
Google Scholar
Plazas M, Andújar I, Vilanova S, Hurtado M, Gramazio P, Herraiz FJ, Prohens J: Breeding for chlorogenic acid content in eggplant: interest and prospects. Not Bot Horti Agrobot Cluj-Napoca. 2013, 41 (1): 26-35.
CAS
Google Scholar
Mennella G, Lo Scalzo R, Fibiani M, D’Alessandro A, Francese G, Toppino L, Acciarri N, de Almeida AE, Rotino GL: Chemical and bioactive quality traits during fruit ripening in eggplant (S. melongena L.) and allied species. J Agric Food Chem. 2012, 60: 11821-11831. 10.1021/jf3037424.
Article
CAS
PubMed
Google Scholar
Prohens J, Whitaker BD, Plazas M, Vilanova S, Hurtado M, Blasco M, Gramazio P, Stommel JR: Genetic diversity in morphological characters and phenolic acids content resulting from an interspecific cross between eggplant, Solanum melongena, and its wild ancestor (S. incanum). Ann Appl Biol. 2013, 162: 242-257. 10.1111/aab.12017.
Article
CAS
Google Scholar
Singh AP, Luthria D, Wilson T, Vorsa N, Singh V, Banuelos GS, Pasakdee S: Polyphenols content and antioxidant capacity of eggplant pulp. Food Chem. 2009, 114: 955-961. 10.1016/j.foodchem.2008.10.048.
Article
CAS
Google Scholar
Stommel JR, Whitaker BD: Phenolic acid content and composition of eggplant fruit in a germplasm core subset. J Am Soc Hort Sci. 2003, 128: 704-710.
CAS
Google Scholar
Whitaker BD, Stommel JR: Distribution of hydroxycinnamic acid conjugates in fruit of commercial eggplant (Solanum melongena L.) cultivars. J Agric Food Chem. 2003, 51: 3448-3454. 10.1021/jf026250b.
Article
CAS
PubMed
Google Scholar
Cho A, Jeon S, Kim M, Yeo J, Seo K, Choi M, Lee M: Chlorogenic acid exhibits anti-obesity property and improves lipid metabolism in high-fat diet-induced-obese mice. Food Chem Toxicol. 2010, 48: 937-943. 10.1016/j.fct.2010.01.003.
Article
CAS
PubMed
Google Scholar
Dos Santos MD, Almeida MC, Lopes NP, De Souza GEP: Evaluation of the anti-inflammatory, analgesic and antipyretic activities of the natural polyphenol chlorogenic acid. Biol Pharm Bull. 2006, 29: 2236-2240. 10.1248/bpb.29.2236.
Article
CAS
PubMed
Google Scholar
Luthria D, Singh AP, Wilson T, Vorsa N, Banuelos GS, Vinyard BT: Influence of conventional and organic agricultural practices on the phenolic content in eggplant pulp: plant-to-plant variation. Food Chem. 2010, 121: 406-411. 10.1016/j.foodchem.2009.12.055.
Article
CAS
Google Scholar
Lester RN, Hasan SMZ: Origin and domestication of the brinjal eggplant, Solanum melongena, from S. incanum, in Africa and Asia. Solanaceae III: Taxonomy, Chemistry, Evolution. Edited by: Hawkes JG, Lester RN, Nee MH, Estrada N. 1991, Royal Botanic Gardens, Kew, London, UK, 369-388.
Google Scholar
Knapp S, Vorontsova MS, Prohens J: Wild relatives of the eggplant (Solanum melongena L.: Solanaceae): new understanding of species names in a complex group. PLoS One 2013, 8:e57039.,
Article
PubMed Central
CAS
PubMed
Google Scholar
Ma C, Dastmalchi K, Whitaker BD, Kennelly EJ: Two new antioxidant malonated caffeoylquinic acid isomers in fruits of wild eggplant relatives. J Agric Food Chem. 2011, 59: 9645-9651. 10.1021/jf202028y.
Article
CAS
PubMed
Google Scholar
Ramirez EC, Whitaker JR, Virador VM: Polyphenol Oxidase. Handbook of Food Enzymology. Edited by: Whitaker JR, Voragen AGJ, Wong DWS. 2003, Marcel Dekker, Inc, New York, 509-524.
Google Scholar
Concellón A, Zaro MJ, Chaves AR, Vicente AR: Changes in quality and phenolic antioxidants in dark purple American eggplant (Solanum melongena L. cv. Lucía) as affected by storage at 0°C and 10°C. Postharvest Biol Technol. 2012, 66: 35-41. 10.1016/j.postharvbio.2011.12.003.
Article
Google Scholar
Doğan M, Arslan O, Doğan S: Substrate specificity, heat inactivation and inhibition of polyphenol oxidase from different aubergine cultivars. Int J Food Sci Tech. 2002, 37: 415-423. 10.1046/j.1365-2621.2002.00580.x.
Article
Google Scholar
Shetty SM, Chandrashekar A, Venkatesh YP: Eggplant polyphenol oxidase multigene family: cloning, phylogeny, expression analyses and immunolocalization in response to wounding. Phytochemistry. 2011, 72: 2275-2287. 10.1016/j.phytochem.2011.08.028.
Article
CAS
PubMed
Google Scholar
Comino C, Lanteri S, Portis E, Acquadro A, Romani A, Hehn A, Larbat R, Bourgaud F: Isolation and functional characterization of a cDNA coding a hydroxycinnamoyltransferase involved in phenylpropanoid biosynthesis in Cynara cardunculus L. BMC Plant Biol 2007, 7:14.,
Article
PubMed Central
PubMed
Google Scholar
Comino C, Hehn A, Moglia A, Menin B, Bourgaud F, Lanteri S, Portis E: The isolation and mapping of a novel hydroxycinnamoyltransferase in the globe artichoke chlorogenic acid pathway. BMC Plant Biol 2009, 9:30.,
Article
PubMed Central
PubMed
Google Scholar
Menin B, Comino C, Moglia A, Dolzhenko Y, Portis E, Lanteri S: Identification and mapping of genes related to caffeoylquinic acid synthesis in Cynara cardunculus L. Plant Sci. 2010, 179: 338-347. 10.1016/j.plantsci.2010.06.010.
Article
CAS
Google Scholar
Niggeweg R, Michael A, Martin C: Engineering plants with increased levels of the antioxidant chlorogenic acid. Nat Biotechnol. 2004, 22: 746-754. 10.1038/nbt966.
Article
CAS
PubMed
Google Scholar
Nunome T, Ishiguro K, Yoshida T, Hirai M: Mapping of fruit shape and color development traits in eggplant (Solanum melongena L.) based on RAPD and AFLP markers. Breed Sci. 2001, 51: 19-26. 10.1270/jsbbs.51.19.
Article
CAS
Google Scholar
Nunome T, Suwabe K, Ohyama A, Fukuoka H: Characterization of trinucleotide microsatellites in eggplant. Breed Sci. 2003, 53: 77-83. 10.1270/jsbbs.53.77.
Article
CAS
Google Scholar
Nunome T, Negoro S, Kono I, Kanamori H, Miyatake K, Yamaguchi H, Ohyama A, Fukuoka H: Development of SSR markers derived from SSR-enriched genomic library of eggplant (Solanum melongena L.). Theor Appl Genet. 2009, 119: 1143-1153. 10.1007/s00122-009-1116-0.
Article
PubMed
Google Scholar
Doganlar S, Frary A, Daunay M, Lester RN, Tanksley SD: A comparative genetic linkage map of eggplant (Solanum melongena) and its implications for genome evolution in the Solanaceae. Genetics. 2002, 161: 1697-1711.
PubMed Central
CAS
PubMed
Google Scholar
Wu F, Eannetta NT, Xu Y, Tanksley SD: A detailed synteny map of the eggplant genome based on conserved ortholog set II (COSII) markers. Theor Appl Genet. 2009, 118: 927-935. 10.1007/s00122-008-0950-9.
Article
CAS
PubMed
Google Scholar
Doganlar S, Frary A, Daunay M, Huvenaars K, Mank R, Frary A: High resolution map of eggplant (Solanum melongena) reveals extensive chromosome rearrangement in domesticated members of the Solanaceae. Euphytica. 2014, 197: 211-228. 10.1007/s10681-013-1060-6.
Article
Google Scholar
Barchi L, Lanteri S, Portis E, Stàgel A, Valè G, Toppino L, Rotino GL: Segregation distortion and linkage analysis in eggplant (Solanum melongena L.). Genome. 2010, 53: 805-815. 10.1139/G10-073.
Article
CAS
PubMed
Google Scholar
Fukuoka H, Miyatake K, Nunome T, Negoro S, Shirasawa K, Isobe S, Asamizu E, Yamaguchi H, Ohyama A: Development of gene-based markers and construction of an integrated linkage map in eggplant by using Solanum orthologous (SOL) gene sets. Theor Appl Genet. 2012, 125: 47-56. 10.1007/s00122-012-1815-9.
Article
CAS
PubMed
Google Scholar
Barchi L, Lanteri S, Portis E, Valè G, Volante A, Pulcini L, Ciriaci T, Acciarri N, Barbierato V, Toppino L: A RAD Tag derived marker based eggplant linkage map and the location of QTLs determining anthocyanin pigmentation. PLoS One 2012, 7:e43740.,
Article
PubMed Central
CAS
PubMed
Google Scholar
Fulton TM, Van der Hoeven R, Eannetta NT, Tanksley SD: Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plants. Plant Cell. 2002, 14: 1457-1467. 10.1105/tpc.010479.
Article
PubMed Central
CAS
PubMed
Google Scholar
The Angiosperm Phylogeny Group: An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG II. Bot J Linn Soc. 2003, 141: 399-436. 10.1046/j.1095-8339.2003.t01-1-00158.x.
Article
Google Scholar
Vilanova S, Manzur JP, Prohens J: Development and characterization of genomic simple sequence repeat markers in eggplant and their application to the study of diversity and relationships in a collection of different cultivar types and origins. Mol Breed. 2012, 30: 647-660. 10.1007/s11032-011-9650-2.
Article
CAS
Google Scholar
Fukuoka H, Yamaguchi H, Nunome T, Negoro S, Miyatake K, Ohyama A: Accumulation, functional annotation, and comparative analysis of expressed sequence tags in eggplant (Solanum melongena L.), the third pole of the genus Solanum species after tomato and potato. Gene. 2010, 450: 76-84. 10.1016/j.gene.2009.10.006.
Article
CAS
PubMed
Google Scholar
Barchi L, Lanteri S, Portis E, Acquadro A, Valè G, Toppino L, Rotino GL: Identification of SNP and SSR markers in eggplant using RAD tag sequencing. BMC Genomics 2011, 12:304.,
Article
PubMed Central
CAS
PubMed
Google Scholar
Jeuken M, Van Wijk R, Peleman J, Lindhout P: An integrated interspecific AFLP map of lettuce (Lactuca) based on two L. sativa × L. saligna F2 populations. Theor Appl Genet. 2001, 103: 638-647. 10.1007/s001220100657.
Article
CAS
Google Scholar
Shirasawa K, Ishii K, Kim C, Ban T, Suzuki M, Ito T, Muranaka T, Kobayashi M, Nagata N, Isobe S: Development of Capsicum EST–SSR markers for species identification and in silico mapping onto the tomato genome sequence. Mol Breed. 2013, 31: 101-110. 10.1007/s11032-012-9774-z.
Article
PubMed Central
CAS
PubMed
Google Scholar
Alheit KV, Reif JC, Maurer HP, Hahn V, Weissmann EA, Miedaner T, Würschum T: Detection of segregation distortion loci in triticale (x Triticosecale Wittmack) based on a high-density DArT marker consensus genetic linkage map. BMC Genomics 2011, 12:380.,
Article
PubMed Central
CAS
PubMed
Google Scholar
Ren Y, McGregor C, Zhang Y, Gong G, Zhang H, Guo S, Sun H, Cai W, Zhang J, Xu Y: An integrated genetic map based on four mapping populations and quantitative trait loci associated with economically important traits in watermelon (Citrullus lanatus). BMC Plant Biol 2014, 14:33.,
Article
PubMed Central
PubMed
Google Scholar
Prohens J, Rodríguez-Burruezo A, Raigón MD, Nuez F: Total phenolic concentration and browning susceptibility in a collection of different varietal types and hybrids of eggplant: implications for breeding for higher nutritional quality and reduced browning. J Am Soc Hort Sci. 2007, 132: 638-646.
CAS
Google Scholar
Raigón MD, Prohens J, Muñoz-Falcón JE, Nuez F: Comparison of eggplant landraces and commercial varieties for fruit content of phenolics, minerals, dry matter and protein. J Food Compos Anal. 2008, 21: 370-376. 10.1016/j.jfca.2008.03.006.
Article
Google Scholar
Byrne P, McMullen M: Defining genes for agricultural traits: QTL analysis and the candidate gene approach. Proc Natl Acad Sci U S A. 1996, 7: 24-27.
Google Scholar
Vogt T: Phenylpropanoid biosynthesis. Mol Plant. 2010, 3: 2-20. 10.1093/mp/ssp106.
Article
CAS
PubMed
Google Scholar
Shi R, Shuford CM, Wang JP, Sun Y, Yang Z, Chen H, Tunlaya-Anukit S, Li Q, Liu J, Muddiman DC: Regulation of phenylalanine ammonia-lyase (PAL) gene family in wood forming tissue of Populus trichocarpa . Planta. 2013, 238: 487-497. 10.1007/s00425-013-1905-1.
Article
CAS
PubMed
Google Scholar
Kumar A, Ellis BE: The phenylalanine ammonia-lyase gene family in raspberry. structure, expression, and evolution. Plant Physiol. 2001, 127: 230-239. 10.1104/pp.127.1.230.
Article
PubMed Central
CAS
PubMed
Google Scholar
Chagné D, Krieger C, Rassam M, Sullivan M, Fraser J, André C, Pindo M, Troggio M, Gardiner SE, Henry RA: QTL and candidate gene mapping for polyphenolic composition in apple fruit. BMC Plant Biol 2012, 12:12.,
Article
PubMed Central
PubMed
Google Scholar
Moglia A, Comino C, Menin B, Portis E, Aquadro A, Beekwilder MJ, Hehn A, Bourgaud F, Lanteri S: Caffeoylquinic acids biosynthesis and accumulation in Cynara cardunculus: state of the art. Acta Hort. 2013, 983: 401-405.
Article
Google Scholar
Portis E, Mauromicale G, Mauro R, Acquadro A, Scaglione D, Lanteri S: Construction of a reference molecular linkage map of globe artichoke (Cynara cardunculus var. scolymus). Theor Appl Genet. 2009, 120: 59-70. 10.1007/s00122-009-1159-2.
Article
CAS
PubMed
Google Scholar
Portis E, Scaglione D, Acquadro A, Mauromicale G, Mauro R, Knapp SJ, Lanteri S: Genetic mapping and identification of QTL for earliness in the globe artichoke/cultivated cardoon complex. BMC Res Notes 2012, 5:252.,
Article
PubMed Central
CAS
PubMed
Google Scholar
Rommens CM, Richael CM, Yan H, Navarre DA, Ye J, Krucker M, Swords K: Engineered native pathways for high kaempferol and caffeoylquinate production in potato. Plant Biotechnol J. 2008, 6: 870-886. 10.1111/j.1467-7652.2008.00362.x.
Article
CAS
PubMed
Google Scholar
André CM, Schafleitner R, Legay S, Lefèvre I, Aliaga CAA, Nomberto G, Hoffmann L, Hausman J, Larondelle Y, Evers D: Gene expression changes related to the production of phenolic compounds in potato tubers grown under drought stress. Phytochemistry. 2009, 70: 1107-1116. 10.1016/j.phytochem.2009.07.008.
Article
PubMed
Google Scholar
Di Guardo M, Tadiello A, Farneti B, Lorenz G, Masuero D, Vrhovsek U, Costa G, Velasco R, Costa F: A multidisciplinary approach providing new insight into fruit flesh browning physiology in apple (Malus x domestica Borkh.). PLoS One 2013, 8:e78004.,
Article
PubMed Central
CAS
PubMed
Google Scholar
Urbany C, Stich B, Schmidt L, Simon L, Berding H, Junghans H, Niehoff KH, Braun A, Tacke E, Hofferbert HR, Lubeck J, Strahwald J, Gebhardt C: Association genetics in Solanum tuberosum provides new insights into potato tuber bruising and enzymatic tissue discoloration. BMC Genomics 2011, 12:7.,
Article
PubMed Central
CAS
PubMed
Google Scholar
Coetzer C, Corsini D, Love S, Pavek J, Tumer N: Control of enzymatic browning in potato (Solanum tuberosum L.) by sense and antisense RNA from tomato polyphenol oxidase. J Agric Food Chem. 2001, 49: 652-657. 10.1021/jf001217f.
Article
CAS
PubMed
Google Scholar
Murata M, Nishimura M, Murai N, Haruta M, Homma S, Itoh Y: A transgenic apple callus showing reduced polyphenol oxidase activity and lower browning potential. Biosci Biotechnol Biochem. 2001, 65: 383-388. 10.1271/bbb.65.383.
Article
CAS
PubMed
Google Scholar
Chai C, Lin Y, Shen D, Wu Y, Li H, Dou D: Identification and functional characterization of the Soybean GmaPPO12 promoter conferring Phytophthora sojae induced expression. PLoS One 2013, 8:e67670.,
Article
PubMed Central
CAS
PubMed
Google Scholar
Newman SM, Tantasawat P, Steffens JC: Tomato polyphenol oxidase B is spatially and temporally regulated during development and in response to ethylene. Molecules. 2011, 16: 493-517. 10.3390/molecules16010493.
Article
CAS
PubMed
Google Scholar
Tran L, Taylor J, Constabel C: The polyphenol oxidase gene family in land plants: lineage-specific duplication and expansion. BMC Genomics 2012, 13:395.,
Article
CAS
Google Scholar
Yamakawa K, Mochizuki H: Nature and inheritance of Fusarium-wilt resistance in eggplant cultivars and related wild Solanum species. Bull Veg Orn Crops Res Stn. 1979, 6: 19-27.
Google Scholar
Stàgel A, Portis E, Toppino L, Rotino GL, Lanteri S: Gene-based microsatellite development for mapping and phylogeny studies in eggplant. BMC Genomics 2008, 9:357.,
Article
PubMed Central
PubMed
Google Scholar
Frary A, Frary A, Daunay M, Huvenaars K, Mank R, Doğanlar S: QTL hotspots in eggplant (Solanum melongena) detected with a high resolution map and CIM analysis. Euphytica. 2014, 197: 211-228. 10.1007/s10681-013-1060-6.
Article
Google Scholar
Portis E, Barchi L, Toppino L, Lanteri S, Acciarri N, Felicioni N, Fusari F, Barbierato V, Cericola F, Valè G, Rotino GL: QTL Mapping in eggplant reveals clusters of yield-related loci and orthology with the tomato genome. PLoS One 2014, 9:e89499.,
Article
PubMed Central
PubMed
Google Scholar
Hirakawa H, Shirasawa K, Miyatake K, Nunome T, Negoro S, Ohyama A, Yamaguchi H, Sato S, Isobe S, Tabata S, Fukuoka H: Draft genome sequence of eggplant (Solanum melongena L.): the representative solanum species indigenous to the old world. DNA Res 2014, 1–12. doi:10.1093/dnares/dsu027,
Doyle J, Doyle J: A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 1987, 19: 11-15.
Google Scholar
Wu F, Mueller LA, Crouzillat D, Pétiard V, Tanksley SD: Combining bioinformatics and phylogenetics to identify large sets of single-copy orthologous genes (COSII) for comparative, evolutionary and systematic studies: a test case in the euasterid plant clade. Genetics. 2006, 174: 1407-1420. 10.1534/genetics.106.062455.
Article
PubMed Central
CAS
PubMed
Google Scholar
Kofler R, Schlötterer C, Lelley T: SciRoKo: a new tool for whole genome microsatellite search and investigation. Bioinformatics. 2007, 23: 1683-1685. 10.1093/bioinformatics/btm157.
Article
CAS
PubMed
Google Scholar
Bombarely A, Menda N, Tecle IY, Buels RM, Strickler S, Fischer-York T, Pujar A, Leto J, Gosselin J, Mueller LA: The Sol Genomics Network (solgenomics.net): growing tomatoes using Perl. Nucleic Acids Res. 2011, 39: D1149-D1155. 10.1093/nar/gkq866.
Article
PubMed Central
CAS
PubMed
Google Scholar
Vos P, Hogers R, Bleeker M, Reijans M, van De Lee T, Hornes M, Friters A, Pot J, Paleman J, Kuiper M: AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res. 1995, 23: 4407-4414. 10.1093/nar/23.21.4407.
Article
PubMed Central
CAS
PubMed
Google Scholar
Hall TA: BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser. 1999, 41: 95-98.
CAS
Google Scholar
Rozen S, Skaletsky H: Primer3 on the WWW for general users and for biologist programmers. Bioinformatics Meth Protocols. 1999, 132: 365-386. 10.1385/1-59259-192-2:365.
Article
Google Scholar
Huang Z, Van Houten J, Gonzalez G, Xiao H, van der Knaap E: Genome-wide identification, phylogeny and expression analysis of SUN, OFP and YABBY gene family in tomato. Mol Genet Genomics. 2013, 288: 111-129. 10.1007/s00438-013-0733-0.
Article
CAS
PubMed
Google Scholar
Van Ooijen J: JoinMap 4. Software for the calculation of genetic linkage maps in experimental populations. Kyazma BV, Wageningen, Netherlands. 2006
Google Scholar
Kosambi D: The estimation of map distances from recombination values. Ann Eugen. 1944, 12: 172-175. 10.1111/j.1469-1809.1943.tb02321.x.
Article
Google Scholar
Krzywinski M, Schein J, Birol İ, Connors J, Gascoyne R, Horsman D, Jones SJ, Marra MA: Circos: an information aesthetic for comparative genomics. Genome Res. 2009, 19: 1639-1645. 10.1101/gr.092759.109.
Article
PubMed Central
CAS
PubMed
Google Scholar