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  1. Heading date, a crucial factor determining regional and seasonal adaptation in rice (Oryza sativa L.), has been a major selection target in breeding programs. Although considerable progress has been made in our u...

    Authors: Kiyosumi Hori, Yasunori Nonoue, Nozomi Ono, Taeko Shibaya, Kaworu Ebana, Kazuki Matsubara, Eri Ogiso-Tanaka, Takanari Tanabata, Kazuhiko Sugimoto, Fumio Taguchi-Shiobara, Jun-ichi Yonemaru, Ritsuko Mizobuchi, Yusaku Uga, Atsunori Fukuda, Tadamasa Ueda, Shin-ichi Yamamoto…
    Citation: BMC Plant Biology 2015 15:115
  2. Tomato fruit ripening is controlled by ethylene and is characterized by a shift in color from green to red, a strong accumulation of lycopene, and a decrease in β-xanthophylls and chlorophylls. The role of oth...

    Authors: Liyan Su, Gianfranco Diretto, Eduardo Purgatto, Saïda Danoun, Mohamed Zouine, Zhengguo Li, Jean-Paul Roustan, Mondher Bouzayen, Giovanni Giuliano and Christian Chervin
    Citation: BMC Plant Biology 2015 15:114
  3. Switchgrass rust, caused by Puccinia emaculata, is an important disease of switchgrass, a potential biofuel crop in the United States. In severe cases, switchgrass rust has the potential to significantly affect b...

    Authors: Upinder S Gill, Srinivasa R Uppalapati, Jin Nakashima and Kirankumar S Mysore
    Citation: BMC Plant Biology 2015 15:113
  4. Lycopene β-cyclase (LCYB) is a key enzyme catalyzing the biosynthesis of β-carotene, the main source of provitamin A. However, there is no documented research about this key cyclase gene’s function and relatio...

    Authors: Jian Zeng, Cheng Wang, Xi Chen, Mingli Zang, Cuihong Yuan, Xiatian Wang, Qiong Wang, Miao Li, Xiaoyan Li, Ling Chen, Kexiu Li, Junli Chang, Yuesheng Wang, Guangxiao Yang and Guangyuan He
    Citation: BMC Plant Biology 2015 15:112
  5. Sugar plays a central role as a source of carbon metabolism and energy production and a signaling molecule in diverse growth and developmental processes and environmental adaptation in plants. It is known that...

    Authors: Eun-Young Jeong, Pil Joon Seo, Je Chang Woo and Chung-Mo Park
    Citation: BMC Plant Biology 2015 15:110
  6. Transfer cells (TCs) are trans-differentiated versions of existing cell types designed to facilitate enhanced membrane transport of nutrients at symplasmic/apoplasmic interfaces. This transport capacity is confer...

    Authors: Suong T T Nguyen and David W McCurdy
    Citation: BMC Plant Biology 2015 15:109
  7. Several studies have focused on cold tolerance in multiple regulated levels. However, a genome-scale molecular analysis of the regulated network under the control of transcription factors (TFs) is still lackin...

    Authors: Xianjun Peng, Qingqing Wu, Linhong Teng, Feng Tang, Zhi Pi and Shihua Shen
    Citation: BMC Plant Biology 2015 15:108
  8. Domestication has played an important role in shaping characteristics of the inflorescence and plant height in cultivated cereals. Taking advantage of meta-analysis of QTLs, phylogenetic analyses in 502 divers...

    Authors: Dong Zhang, Wenqian Kong, Jon Robertson, Valorie H Goff, Ethan Epps, Alexandra Kerr, Gabriel Mills, Jay Cromwell, Yelena Lugin, Christine Phillips and Andrew H Paterson
    Citation: BMC Plant Biology 2015 15:107
  9. The major proteins in lupin seeds are conglutins that have primary roles in supplying carbon, sulphur and nitrogen and energy for the germinating seedling. They fall into four families; α, β, γ and δ. Interest...

    Authors: Rhonda C Foley, Jose C Jimenez-Lopez, Lars G Kamphuis, James K Hane, Su Melser and Karam B Singh
    Citation: BMC Plant Biology 2015 15:106
  10. Radish (Raphanus sativus L., 2n = 2x = 18) is a major root vegetable crop especially in eastern Asia. Radish root contains various nutritions which play an important role in strengthening immunity. Repetitive ele...

    Authors: Qunyan He, Zexi Cai, Tianhua Hu, Huijun Liu, Chonglai Bao, Weihai Mao and Weiwei Jin
    Citation: BMC Plant Biology 2015 15:105
  11. Rubber tree (Hevea brasiliensis Muell. Arg.) is the primarily commercial source of natural rubber in the world. Latex regeneration and duration of latex flow after tapping are the two factors that determine rubbe...

    Authors: Jinquan Chao, Yueyi Chen, Shaohua Wu and Wei-Min Tian
    Citation: BMC Plant Biology 2015 15:104
  12. Transfer cells are characterized by intricate ingrowth walls, comprising an uniform wall upon which wall ingrowths are deposited. The ingrowth wall forms a scaffold to support an amplified plasma membrane surf...

    Authors: Hui-Ming Zhang, Simon Wheeler, Xue Xia, Ruslana Radchuk, Hans Weber, Christina E Offler and John W Patrick
    Citation: BMC Plant Biology 2015 15:103
  13. The dynamics of plant volatile (PV) emission, and the relationship between damaged area and biosynthesis of bioactive molecules in plant-insect interactions, remain open questions. Direct Contact-Sorptive Tape...

    Authors: Lorenzo Boggia, Barbara Sgorbini, Cinzia M Bertea, Cecilia Cagliero, Carlo Bicchi, Massimo E Maffei and Patrizia Rubiolo
    Citation: BMC Plant Biology 2015 15:102
  14. Sorbitol dehydrogenase (SDH, EC 1.1.1.14) is the key enzyme involved in sorbitol metabolism in higher plants. SDH genes in some Rosaceae species could be divided into two groups. L-idonate-5-dehydrogenase (LIDH, ...

    Authors: Yong Jia, Darren CJ Wong, Crystal Sweetman, John B Bruning and Christopher M Ford
    Citation: BMC Plant Biology 2015 15:101
  15. Key innovations have facilitated novel niche utilization, such as the movement of the algal predecessors of land plants into terrestrial habitats where drastic fluctuations in light intensity, ultraviolet radi...

    Authors: Tracey A Ruhlman, Wan-Jung Chang, Jeremy JW Chen, Yao-Ting Huang, Ming-Tsair Chan, Jin Zhang, De-Chih Liao, John C Blazier, Xiaohua Jin, Ming-Che Shih, Robert K Jansen and Choun-Sea Lin
    Citation: BMC Plant Biology 2015 15:100
  16. Physical maps created from large insert DNA libraries, typically cloned in BAC vector, are valuable resources for map-based cloning and de novo genome sequencing. The maps are most useful if contigs of overlappin...

    Authors: Kateřina Cviková, Federica Cattonaro, Michael Alaux, Nils Stein, Klaus FX Mayer, Jaroslav Doležel and Jan Bartoš
    Citation: BMC Plant Biology 2015 15:99
  17. Plants colonized terrestrial environments approximately 480 million years ago and have contributed significantly to the diversification of life on Earth. Phylogenetic analyses position a subset of charophyte a...

    Authors: Péter Szövényi, Eftychios Frangedakis, Mariana Ricca, Dietmar Quandt, Susann Wicke and Jane A Langdale
    Citation: BMC Plant Biology 2015 15:98
  18. Wheat seeds provide a staple food and an important protein source for the world’s population. Seed germination is vital to wheat growth and development and directly affects grain yield and quality. In this stu...

    Authors: Miao He, Chong Zhu, Kun Dong, Ting Zhang, Zhiwei Cheng, Jiarui Li and Yueming Yan
    Citation: BMC Plant Biology 2015 15:97
  19. Autophagy-related ATG6 proteins are pleiotropic proteins functioning in autophagy and the phosphatidylinositol 3-phosphate-signaling pathways. Arabidopsis ATG6 regulates normal plant growth, pollen development an...

    Authors: Jieyu Yue, Hong Sun, Wei Zhang, Dan Pei, Yang He and Huazhong Wang
    Citation: BMC Plant Biology 2015 15:95
  20. In order to clarify the origin of spring growth habit in modern domesticated wheat, allelic variability of the VRN-1 gene was investigated in a wide set of accessions of the wild tetraploid species Triticum dicoc...

    Authors: Andrey B Shcherban, Kseniya V Strygina and Elena A Salina
    Citation: BMC Plant Biology 2015 15:94
  21. Capsaicinoids, including capsaicin and its analogs, are responsible for the pungency of pepper (Capsicum species) fruits. Even though capsaicin is familiar and used daily by humans, the genes involved in the caps...

    Authors: Kana Ogawa, Katsunori Murota, Hanako Shimura, Misaki Furuya, Yasuko Togawa, Takeshi Matsumura and Chikara Masuta
    Citation: BMC Plant Biology 2015 15:93
  22. The modular body structure of plants enables detached plant organs, such as postharvest fruits and vegetables, to maintain active responsiveness to environmental stimuli, including daily cycles of light and da...

    Authors: John D Liu, Danielle Goodspeed, Zhengji Sheng, Baohua Li, Yiran Yang, Daniel J Kliebenstein and Janet Braam
    Citation: BMC Plant Biology 2015 15:92
  23. Rapeseed (B. napus, AACC, 2n = 38) is one of the most important oil seed crops in the world, it is also one of the most common oil for production of biodiesel. Its oil is a mixture of various fatty acids and diss...

    Authors: Xiaodong Wang, Yan Long, Yongtai Yin, Chunyu Zhang, Lu Gan, Liezhao Liu, Longjiang Yu, Jinling Meng and Maoteng Li
    Citation: BMC Plant Biology 2015 15:91
  24. Phytophthora blight caused by Phytophthora cajani is an emerging disease of pigeonpea (Cajanus cajan L.) affecting the crop irrespective of cropping system, cultivar grown and soil types. Current detection and id...

    Authors: Mamta Sharma, Raju Ghosh, Avijit Tarafdar and Rameshwar Telangre
    Citation: BMC Plant Biology 2015 15:90
  25. Polyploidy has often been considered to confer plants a better adaptation to environmental stresses. Tetraploid citrus rootstocks are expected to have stronger stress tolerance than diploid. Plenty of doubled ...

    Authors: Feng-Quan Tan, Hong Tu, Wu-Jun Liang, Jian-Mei Long, Xiao-Meng Wu, Hong-Yan Zhang and Wen-Wu Guo
    Citation: BMC Plant Biology 2015 15:89
  26. The cell cycle and cellular oxidative stress responses are tightly controlled for proper growth and development of Scots pine (Pinus sylvestris L.) seed. Programmed cell death (PCD) is an integral part of the emb...

    Authors: Jaana Vuosku, Suvi Sutela, Johanna Kestilä, Anne Jokela, Tytti Sarjala and Hely Häggman
    Citation: BMC Plant Biology 2015 15:88
  27. Protein degradation is a basic cell process that operates in general protein turnover or to produce bioactive peptides. However, very little is known about the qualitative and quantitative composition of a pla...

    Authors: Igor A Fesenko, Georgij P Arapidi, Alexander Yu Skripnikov, Dmitry G Alexeev, Elena S Kostryukova, Alexander I Manolov, Ilya A Altukhov, Regina A Khazigaleeva, Anna V Seredina, Sergey I Kovalchuk, Rustam H Ziganshin, Viktor G Zgoda, Svetlana E Novikova, Tatiana A Semashko, Darya K Slizhikova, Vasilij V Ptushenko…
    Citation: BMC Plant Biology 2015 15:87
  28. Cyclin-dependent kinases (CDKs) are crucial regulators of cell cycle progression in eukaryotes. The diatom CDKA2 was originally assigned to the classical A-type CDKs, but its cell cycle phase-specific transcripti...

    Authors: Marie JJ Huysman, Atsuko Tanaka, Chris Bowler, Wim Vyverman and Lieven De Veylder
    Citation: BMC Plant Biology 2015 15:86
  29. Cytokinins (CKs) are involved in response to various environmental cues, including salinity. It has been previously reported that enhancing CK contents improved salt stress tolerance in tomato. However, the un...

    Authors: Eva Žižková, Petre I Dobrev, Yordan Muhovski, Petr Hošek, Klára Hoyerová, Daniel Haisel, Dagmar Procházková, Stanley Lutts, Václav Motyka and Imène Hichri
    Citation: BMC Plant Biology 2015 15:85
  30. Shoot branching is an important determinant of plant architecture and influences various aspects of growth and development. Selection on branching has also played an important role in the domestication of crop...

    Authors: Savithri U Nambeesan, Jennifer R Mandel, John E Bowers, Laura F Marek, Daniel Ebert, Jonathan Corbi, Loren H Rieseberg, Steven J Knapp and John M Burke
    Citation: BMC Plant Biology 2015 15:84
  31. Variation in the reaction wood (RW) response has been shown to be a principle component driving differences in lignocellulosic sugar yield from the bioenergy crop willow. The phenotypic cause(s) behind these d...

    Authors: Nicholas James Beresford Brereton, Farah Ahmed, Daniel Sykes, Michael Jason Ray, Ian Shield, Angela Karp and Richard James Murphy
    Citation: BMC Plant Biology 2015 15:83
  32. Grape production in continental climatic regions suffers from the combination of drought and cold stresses during winter. Developing a reliable system to simulate combined drought–cold stress and to determine ...

    Authors: Lingye Su, Zhanwu Dai, Shaohua Li and Haiping Xin
    Citation: BMC Plant Biology 2015 15:82
  33. Plant domestication involves complex morphological and physiological modification of wild species to meet human needs. Artificial selection during soybean domestication and improvement results in substantial p...

    Authors: Shancen Zhao, Fengya Zheng, Weiming He, Haiyang Wu, Shengkai Pan and Hon-Ming Lam
    Citation: BMC Plant Biology 2015 15:81
  34. Mapping centromere locations in plant species provides essential information for the analysis of genetic structures and population dynamics. The centromere’s position affects the distribution of crossovers alo...

    Authors: Pablo Aleza, José Cuenca, María Hernández, José Juárez, Luis Navarro and Patrick Ollitrault
    Citation: BMC Plant Biology 2015 15:80
  35. MicroRNAs (miRNAs) are non-coding RNA molecules which have recently emerged as important gene regulators in plants and their gene expression analysis is becoming increasingly important. miRNAs regulate gene ex...

    Authors: Arnaud T Djami-Tchatchou and Ian A Dubery
    Citation: BMC Plant Biology 2015 15:79
  36. The species of Utricularia attract attention not only owing to their carnivorous lifestyle, but also due to an elevated substitution rate and a dynamic evolution of genome size leading to its dramatic reduction. ...

    Authors: Jiří Bárta, James D Stone, Jiří Pech, Dagmara Sirová, Lubomír Adamec, Matthew A Campbell and Helena Štorchová
    Citation: BMC Plant Biology 2015 15:78
  37. Although many of the volatile constituents of flavor and aroma in citrus have been identified, the knowledge of molecular mechanisms and regulation of volatile production are very limited. Our aim was to under...

    Authors: Qibin Yu, Anne Plotto, Elizabeth A Baldwin, Jinhe Bai, Ming Huang, Yuan Yu, Harvinder S Dhaliwal and Frederick G Gmitter Jr
    Citation: BMC Plant Biology 2015 15:76
  38. Histone acetyltransferase complex NuA4 and histone variant exchanging complex SWR1 are two chromatin modifying complexes which act cooperatively in yeast and share some intriguing structural similarities. Prot...

    Authors: Tomasz Bieluszewski, Lukasz Galganski, Weronika Sura, Anna Bieluszewska, Mateusz Abram, Agnieszka Ludwikow, Piotr Andrzej Ziolkowski and Jan Sadowski
    Citation: BMC Plant Biology 2015 15:75
  39. Eco1/Ctf7 is essential for the establishment of sister chromatid cohesion during S phase of the cell cycle. Inactivation of Ctf7/Eco1 leads to a lethal phenotype in most organisms. Altering Eco1/Ctf7 levels or...

    Authors: Desheng Liu and Christopher A Makaroff
    Citation: BMC Plant Biology 2015 15:74
  40. The major wheat seed proteins are storage proteins that are synthesized in the rough endoplasmic reticulum (ER) of starchy endosperm cells. Many of these proteins have intra- and intermolecular disulfide bonds...

    Authors: Shizuka Kimura, Yuki Higashino, Yuki Kitao, Taro Masuda and Reiko Urade
    Citation: BMC Plant Biology 2015 15:73
  41. The transcription factor DOF AFFECTING GERMINATION1 (DAG1) is a repressor of the light-mediated seed germination process. DAG1 acts downstream PHYTOCHROME INTERACTING FACTOR3-LIKE 5 (PIL5), the master represso...

    Authors: Silvia Santopolo, Alessandra Boccaccini, Riccardo Lorrai, Veronica Ruta, Davide Capauto, Emanuele Minutello, Giovanna Serino, Paolo Costantino and Paola Vittorioso
    Citation: BMC Plant Biology 2015 15:72
  42. Melon (Cucumis melo) fruits exhibit phenotypic diversity in several key quality determinants such as taste, color and aroma. Sucrose, carotenoids and volatiles are recognized as the key compounds shaping the abov...

    Authors: Shiri Freilich, Shery Lev, Itay Gonda, Eli Reuveni, Vitaly Portnoy, Elad Oren, Marc Lohse, Navot Galpaz, Einat Bar, Galil Tzuri, Guy Wissotsky, Ayala Meir, Joseph Burger, Yaakov Tadmor, Arthur Schaffer, Zhangjun Fei…
    Citation: BMC Plant Biology 2015 15:71
  43. In plants and animals, a large number of double-stranded RNA binding proteins (DRBs) have been shown to act as non-catalytic cofactors of DICERs and to participate in the biogenesis of small RNAs involved in R...

    Authors: Marion Clavel, Thierry Pélissier, Julie Descombin, Viviane Jean, Claire Picart, Cyril Charbonel, Julio Saez-Vásquez, Cécile Bousquet-Antonelli and Jean-Marc Deragon
    Citation: BMC Plant Biology 2015 15:70
  44. Rootstocks play a major role in the tolerance of citrus plants to water deficit by controlling and adjusting the water supply to meet the transpiration demand of the shoots. Alterations in protein abundance in...

    Authors: Tahise M Oliveira, Fernanda R da Silva, Diego Bonatto, Diana M Neves, Raphael Morillon, Bianca E Maserti, Mauricio A Coelho Filho, Marcio GC Costa, Carlos P Pirovani and Abelmon S Gesteira
    Citation: BMC Plant Biology 2015 15:69
  45. Wheat (AABBDD, 2n = 6x = 42) is a major dietary component for many populations across the world. Bread-making quality of wheat is mainly determined by glutenin subunits, but it remains challenging to elucidate...

    Authors: Guangbin Luo, Xiaofei Zhang, Yanlin Zhang, Wenlong Yang, Yiwen Li, Jiazhu Sun, Kehui Zhan, Aimin Zhang and Dongcheng Liu
    Citation: BMC Plant Biology 2015 15:68
  46. Plant nutrition and climatic conditions play important roles on the growth and secondary metabolites of stevia (Stevia rebaudiana Bertoni); however, the nutritional dose is strongly governed by the soil propertie...

    Authors: Probir Kumar Pal, Rajender Kumar, Vipan Guleria, Mitali Mahajan, Ramdeen Prasad, Vijaylata Pathania, Baljinder Singh Gill, Devinder Singh, Gopi Chand, Bikram Singh, Rakesh Deosharan Singh and Paramvir Singh Ahuja
    Citation: BMC Plant Biology 2015 15:67
  47. The availability of increasing numbers of sequenced genomes has necessitated a re-evaluation of the evolution of the WRKY transcription factor family. Modern day plants descended from a charophyte green alga t...

    Authors: Charles I Rinerson, Roel C Rabara, Prateek Tripathi, Qingxi J Shen and Paul J Rushton
    Citation: BMC Plant Biology 2015 15:66

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