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  1. Heading and aftermath heading are important traits in perennial ryegrass because they impact forage quality. So far, genome-wide association analyses in this major forage species have only identified a small n...

    Authors: Sai Krishna Arojju, Susanne Barth, Dan Milbourne, Patrick Conaghan, Janaki Velmurugan, Trevor R. Hodkinson and Stephen L. Byrne
    Citation: BMC Plant Biology 2016 16:160
  2. Bruchid beetles are an important storage pest of grain legumes. Callosobruchus sp. infect mungbean (Vigna radiata) at low levels in the field, multiply during grain storage and can destroy seed stocks in a few mo...

    Authors: Roland Schafleitner, Shu-mei Huang, Shui-hui Chu, Jo-yi Yen, Chen-yu Lin, Miao-rong Yan, Bharath Krishnan, Mao-sen Liu, Hsiao-feng Lo, Chien-yu Chen, Long-fang O. Chen, Dung-chi Wu, Thu-Giang Thi Bui, Srinivasan Ramasamy, Chih-wei Tung and Ramakrishnan Nair
    Citation: BMC Plant Biology 2016 16:159
  3. Family members of sucrose non-fermenting 1-related kinase 2 (SnRK2), being plant-specific serine/threonine protein kinases, constitute the central core of abscisic acid (ABA)-dependent and ABA-independent sign...

    Authors: Avishek Dey, Milan Kumar Samanta, Srimonta Gayen and Mrinal K. Maiti
    Citation: BMC Plant Biology 2016 16:158
  4. The atmospheric CO2 concentration is rising continuously, and abnormal precipitation may occur more frequently in the future. Although the effects of elevated CO2 and drought on plants have been well reported ind...

    Authors: Yanling Jiang, Zhenzhu Xu, Guangsheng Zhou and Tao Liu
    Citation: BMC Plant Biology 2016 16:157
  5. The developmental and cell death domain (DCD)-containing asparagine-rich proteins (NRPs) were first identified in soybean (Glycine max) as transducers of a cell death signal derived from prolonged endoplasmic ret...

    Authors: Pedro A. B. Reis, Paola A. Carpinetti, Paula P.J. Freitas, Eulálio G.D. Santos, Luiz F. Camargos, Igor H.T. Oliveira, José Cleydson F. Silva, Humberto H. Carvalho, Maximiller Dal-Bianco, Juliana R.L. Soares-Ramos and Elizabeth P. B. Fontes
    Citation: BMC Plant Biology 2016 16:156
  6. β-carotene, the most active provitamin A molecule produced by plants, plays important roles in human nutrition and health. β-carotene does not usually accumulate in the endosperm (i.e. flour) of mature wheat g...

    Authors: Xiaoqiong Qin, Kathryn Fischer, Shu Yu, Jorge Dubcovsky and Li Tian
    Citation: BMC Plant Biology 2016 16:155
  7. Genomic libraries of introgression lines (ILs) consist of collections of homozygous lines with a single chromosomal introgression from a donor genotype in a common, usually elite, genetic background, represent...

    Authors: Gorka Perpiñá, Cristina Esteras, Yves Gibon, Antonio J. Monforte and Belén Picó
    Citation: BMC Plant Biology 2016 16:154
  8. Plants have evolved complex coordinated regulatory networks to cope with deficiency of phosphate (Pi) in their growth environment; however, the detailed molecular mechanisms that regulate Pi sensing and signal...

    Authors: Huijuan Zhang, Lei Huang, Yongbo Hong and Fengming Song
    Citation: BMC Plant Biology 2016 16:152
  9. Some plants develop a breeding system that produces both chasmogamous (CH) and cleistogamous (CL) flowers. However, the underlying molecular mechanism remains elusive.

    Authors: Qiaoxia Li, Qingdi Huo, Juan Wang, Jing Zhao, Kun Sun and Chaoying He
    Citation: BMC Plant Biology 2016 16:151
  10. In wheat, grain filling is closely related to flag leaf characteristics and function. Stomata are specialized leaf epidermal cells which regulate photosynthetic CO2 uptake and water loss by transpiration. Underst...

    Authors: Fahimeh Shahinnia, Julien Le Roy, Benjamin Laborde, Beata Sznajder, Priyanka Kalambettu, Saba Mahjourimajd, Joanne Tilbrook and Delphine Fleury
    Citation: BMC Plant Biology 2016 16:150
  11. Seasonal variation is presumed to play an important role in the regulation of tree growth, especially for Eucalyptus grandis, a fast-growing tree. This variation may induce changes in the whole tree at transcript...

    Authors: Ilara Gabriela Frasson Budzinski, David H. Moon, Júlia Silva Morosini, Pernilla Lindén, Juliano Bragatto, Thomaz Moritz and Carlos Alberto Labate
    Citation: BMC Plant Biology 2016 16:149
  12. Xanthophylls are oxygenated carotenoids and fulfill critical roles in plant growth and development. In plants, two different types of carotene hydroxylases, non-heme di-iron and heme-containing cytochrome P450...

    Authors: Gang Ma, Lancui Zhang, Witchulada Yungyuen, Issei Tsukamoto, Natsumi Iijima, Michiru Oikawa, Kazuki Yamawaki, Masaki Yahata and Masaya Kato
    Citation: BMC Plant Biology 2016 16:148
  13. Lysine (Lys) is considered to be the first limiting essential amino acid in rice. Although there have been extensive efforts to improve the Lys content of rice through traditional breeding and genetic engineer...

    Authors: Xin Liu, Cuicui Zhang, Xiurong Wang, Qiaoquan Liu, Dingyang Yuan, Gang Pan, Samuel S. M. Sun and Jumin Tu
    Citation: BMC Plant Biology 2016 16:147
  14. Adventitious root development is a complex process regulated through a variety of signaling molecules. Hydrogen gas (H2) and nitric oxide (NO), two new signaling molecules are both involved in plant development a...

    Authors: Yongchao Zhu, Weibiao Liao, Lijuan Niu, Meng Wang and Zhanjun Ma
    Citation: BMC Plant Biology 2016 16:146
  15. The acid component of grape berries, originating in the metabolism of malate and tartrate, the latter being less well-known than the former, is a key factor at play in the microbiological stability of wines de...

    Authors: Céline Cholet, Stéphane Claverol, Olivier Claisse, Amélie Rabot, Audrey Osowsky, Vincent Dumot, Gerald Ferrari and Laurence Gény
    Citation: BMC Plant Biology 2016 16:144
  16. The INNER NO OUTER (INO) gene is expressed in the outermost cell layer of the outer integument of bitegmic ovules and is essential for this organ’s growth. The role and cross-species functional conservation of IN...

    Authors: Debra J. Skinner, Ryan H. Brown, Robert K. Kuzoff and Charles S. Gasser
    Citation: BMC Plant Biology 2016 16:143
  17. Molecular markers associated with relevant agronomic traits could significantly reduce the time and cost involved in developing new sugarcane varieties. Previous sugarcane genome-wide association analyses (GWA...

    Authors: Josefina Racedo, Lucía Gutiérrez, María Francisca Perera, Santiago Ostengo, Esteban Mariano Pardo, María Inés Cuenya, Bjorn Welin and Atilio Pedro Castagnaro
    Citation: BMC Plant Biology 2016 16:142
  18. In cereal crops such as wheat, an optimal timing of developmental transitions is required to maximize grain yield. Many of these developmental changes are precisely regulated by changes in the duration, intens...

    Authors: Stephen Pearce, Nestor Kippes, Andrew Chen, Juan Manuel Debernardi and Jorge Dubcovsky
    Citation: BMC Plant Biology 2016 16:141
  19. Panicoideae are the second largest subfamily in Poaceae (grass family), with 212 genera and approximately 3316 species. Previous studies have begun to reveal relationships within the subfamily, but largely lac...

    Authors: Sean V. Burke, William P. Wysocki, Fernando O. Zuloaga, Joseph M. Craine, J. Chris Pires, Patrick P. Edger, Dustin Mayfield-Jones, Lynn G. Clark, Scot A. Kelchner and Melvin R. Duvall
    Citation: BMC Plant Biology 2016 16:140
  20. The allohexaploid Crambe abyssinica (crambe) is an oilseed crop that has been recognized for its potential value in the chemical industry, particularly in terms of producing high-erucic acid content vegetable oil...

    Authors: Weicong Qi, Feng Lin, Yuhe Liu, Bangquan Huang, Jihua Cheng, Wei Zhang and Han Zhao
    Citation: BMC Plant Biology 2016 16:139
  21. Plasma membrane intrinsic proteins (PIPs), which belong to aquaporins (AQPs) superfamily, are subdivided into two groups, PIP1 and PIP2, based on sequence similarity. Several PIP2s function as water channels, ...

    Authors: Chunliu Zhuo, Ting Wang, Zhenfei Guo and Shaoyun Lu
    Citation: BMC Plant Biology 2016 16:138
  22. Stearoyl-acyl carrier protein desaturase (SAD) is a key enzyme that catalyses the conversion of stearoyl-acyl carrier protein (ACP) to oleoyl-ACP, a precursor for the biosynthesis of polyunsaturated fatty acids.

    Authors: Hewei Du, Min Huang, Jieyun Hu and Jiansheng Li
    Citation: BMC Plant Biology 2016 16:137
  23. SNF1-related protein kinases 2 (SnRK2s) are key regulators of the plant response to osmotic stress. They are transiently activated in response to drought and salinity. Based on a phylogenetic analysis SnRK2s a...

    Authors: Ewa Krzywińska, Maria Bucholc, Anna Kulik, Arkadiusz Ciesielski, Małgorzata Lichocka, Janusz Dębski, Agnieszka Ludwików, Michał Dadlez, Pedro L. Rodriguez and Grażyna Dobrowolska
    Citation: BMC Plant Biology 2016 16:136
  24. As the indispensable part of plant, leaf blade mainly functions as the production workshops where organic substance is produced by photosynthesis. Leaf colour mutation is a genetic phenomenon that has a high f...

    Authors: Xiaoyan Zhu, Shuang Guo, Zhongwei Wang, Qing Du, Yadi Xing, Tianquan Zhang, Wenqiang Shen, Xianchun Sang, Yinghua Ling and Guanghua He
    Citation: BMC Plant Biology 2016 16:134
  25. Cassava (Manihot esculenta Crantz) storage root provides a staple food source for millions of people worldwide. Increasing the carotenoid content in storage root of cassava could provide improved nutritional and ...

    Authors: Luiz JCB Carvalho, Marco AV Agustini, James V Anderson, Eduardo A Vieira, Claudia RB de Souza, Songbi Chen, Barbara A Schaal and Joseane P Silva
    Citation: BMC Plant Biology 2016 16:133
  26. Among secondary metabolites, flavonoids are particularly crucial for plant growth, development, and reproduction, as well as beneficial for maintenance of human health. As a flowering plant, safflower has synt...

    Authors: YanHua Tu, Fei Liu, DanDan Guo, LiJiao Fan, ZhenXian Zhu, YingRu Xue, Yue Gao and MeiLi Guo
    Citation: BMC Plant Biology 2016 16:132
  27. Salinity stress is a major constrain in the global rice production and hence serious efforts are being undertaken towards deciphering its remedial strategies. The comparative analysis of differential response ...

    Authors: Navdeep Kaur, Manish Dhawan, Isha Sharma and Pratap Kumar Pati
    Citation: BMC Plant Biology 2016 16:131
  28. The amount and structure of genetic diversity in dessert apple germplasm conserved at a European level is mostly unknown, since all diversity studies conducted in Europe until now have been performed on region...

    Authors: Jorge Urrestarazu, Caroline Denancé, Elisa Ravon, Arnaud Guyader, Rémi Guisnel, Laurence Feugey, Charles Poncet, Marc Lateur, Patrick Houben, Matthew Ordidge, Felicidad Fernandez-Fernandez, Kate M. Evans, Frantisek Paprstein, Jiri Sedlak, Hilde Nybom, Larisa Garkava-Gustavsson…
    Citation: BMC Plant Biology 2016 16:130
  29. The low-phosphate-tolerant maize mutant Qi319-96 was obtained from Qi319 through cellular engineering. To elucidate the molecular mechanisms underlying the low-phosphate tolerance of this mutant, we performed ...

    Authors: Kewei Zhang, Hanhan Liu, Jiuling Song, Wei Wu, Kunpeng Li and Juren Zhang
    Citation: BMC Plant Biology 2016 16:129
  30. Breeding for cold tolerance in maize promises to allow increasing growth area and production in temperate zones. The objective of this research was to conduct genome-wide association analyses (GWAS) in tempera...

    Authors: Pedro Revilla, Víctor Manuel Rodríguez, Amando Ordás, Renaud Rincent, Alain Charcosset, Catherine Giauffret, Albrecht E. Melchinger, Chris-Carolin Schön, Eva Bauer, Thomas Altmann, Dominique Brunel, Jesús Moreno-González, Laura Campo, Milena Ouzunova, Ángel Álvarez, José Ignacio Ruíz de Galarreta…
    Citation: BMC Plant Biology 2016 16:127
  31. Plant TRANSPARENT TESTA GLABRA (TTG) proteins regulate various developmental activities via the auxin signaling pathway. Recently, we elucidated the developmental role of tobacco (Nicotiana tabacum L.) NtTTG2 in ...

    Authors: Jun Ge, Baoyan Li, Dan Shen, Junyi Xie, Juying Long and Hansong Dong
    Citation: BMC Plant Biology 2016 16:126
  32. The secondary metabolites of the Artemisia genus are well known for their important therapeutic properties. This genus is one of the valuable sources of flavonoids and other polyphenols, but due to the low conten...

    Authors: Erum Dilshad, Hammad Ismail, Ihsan-ul- Haq, Rosa Maria Cusido, Javier Palazon, Karla Ramirez-Estrada and Bushra Mirza
    Citation: BMC Plant Biology 2016 16:125
  33. MicroRNAs (miRNAs) play a critical role in responses to biotic and abiotic stress and have been characterized in a large number of plant species. Although flax (Linum usitatissimum L.) is one of the most importan...

    Authors: Ying Yu, Guangwen Wu, Hongmei Yuan, Lili Cheng, Dongsheng Zhao, Wengong Huang, Shuquan Zhang, Liguo Zhang, Hongyu Chen, Jian Zhang and Fengzhi Guan
    Citation: BMC Plant Biology 2016 16:124
  34. Dwarfism is one of the most valuable traits in banana breeding because semi-dwarf cultivars show good resistance to damage by wind and rain. Moreover, these cultivars present advantages of convenient cultivati...

    Authors: Jingjing Chen, Jianghui Xie, Yajie Duan, Huigang Hu, Yulin Hu and Weiming Li
    Citation: BMC Plant Biology 2016 16:123
  35. MicroRNAs (miRNAs), a class of small non-coding endogenous RNAs that regulate gene expression post-transcriptionally, play multiple key roles in plant growth and development and in biotic and abiotic stress re...

    Authors: Thangasamy Saminathan, Abiodun Bodunrin, Nripendra V. Singh, Ramajayam Devarajan, Padma Nimmakayala, Moersfelder Jeff, Mallikarjuna Aradhya and Umesh K. Reddy
    Citation: BMC Plant Biology 2016 16:122
  36. The phytohormone ethylene (ET) is a key signaling molecule for inducing the biosynthesis of shikonin and its derivatives, which are secondary metabolites in Lithospermum erythrorhizon. Although ETHYLENE INSENSITI...

    Authors: Rongjun Fang, Ailan Zou, Hua Zhao, Fengyao Wu, Yu Zhu, Hu Zhao, Yonghui Liao, Ren-Jie Tang, Yanjun Pang, Rongwu Yang, Xiaoming Wang, Jinliang Qi, Guihua Lu and Yonghua Yang
    Citation: BMC Plant Biology 2016 16:121
  37. Sugar beet (Beta vulgaris) is an important crop of temperate climate zones, which provides nearly 30 % of the world’s annual sugar needs. From the total genome size of 758 Mb, only 567 Mb were incorporated in the...

    Authors: Teresa Kowar, Falk Zakrzewski, Jiří Macas, Andrea Kobližková, Prisca Viehoever, Bernd Weisshaar and Thomas Schmidt
    Citation: BMC Plant Biology 2016 16:120
  38. Agarwood, is a resinous portion derived from Aquilaria sinensis, has been widely used in traditional medicine and incense. 2-(2-phenylethyl)chromones are principal components responsible for the quality of agarwo...

    Authors: Xiaohui Wang, Bowen Gao, Xiao Liu, Xianjuan Dong, Zhongxiu Zhang, Huiyan Fan, Le Zhang, Juan Wang, Shepo Shi and Pengfei Tu
    Citation: BMC Plant Biology 2016 16:119
  39. Grapevine is a major food crop that is affected by global climate change. Consistent with field studies, dehydration assays of grapevine leaves can reveal valuable information of the plant’s response at physio...

    Authors: Daniel W. Hopper, Ryan Ghan, Karen A. Schlauch and Grant R. Cramer
    Citation: BMC Plant Biology 2016 16:118
  40. The phytohormone ethylene plays a central role in development and senescence of climacteric flowers. In ornamental plant production, ethylene sensitive plants are usually protected against negative effects of ...

    Authors: Line Jensen, Josefine Nymark Hegelund, Andreas Olsen, Henrik Lütken and Renate Müller
    Citation: BMC Plant Biology 2016 16:117
  41. Drought stress is one of the major causes of crop loss. WRKY transcription factors, as one of the largest transcription factor families, play important roles in regulation of many plant processes, including dr...

    Authors: Guan-Hua He, Ji-Yuan Xu, Yan-Xia Wang, Jia-Ming Liu, Pan-Song Li, Ming Chen, You-Zhi Ma and Zhao-Shi Xu
    Citation: BMC Plant Biology 2016 16:116
  42. Drought stress is the major environmental stress that affects plant growth and productivity. It triggers a wide range of responses detectable at molecular, biochemical and physiological levels. At the molecula...

    Authors: Alessandra Fracasso, Luisa M. Trindade and Stefano Amaducci
    Citation: BMC Plant Biology 2016 16:115
  43. Plants constantly monitor changes in photoperiod or day length to trigger the flowering cycle at the most appropriate time of the year. It is well established that photoperiodic flowering is intimately associa...

    Authors: Mi-Jeong Park, Young-Ju Kwon, Kyung-Eun Gil and Chung-Mo Park
    Citation: BMC Plant Biology 2016 16:114
  44. With the increasing interest in metabolic engineering of plants using genetic manipulation and gene editing technologies to enhance growth, nutritional value and environmental adaptation, a major concern is th...

    Authors: Andrew F. Page, Leland J. Cseke, Rakesh Minocha, Swathi A. Turlapati, Gopi K. Podila, Alexander Ulanov, Zhong Li and Subhash C. Minocha
    Citation: BMC Plant Biology 2016 16:113
  45. Plant profilin genes encode core cell-wall structural proteins and are evidenced for their up-regulation under cotton domestication. Notwithstanding striking discoveries in the genetics of cell-wall organizati...

    Authors: Dhananjay K. Pandey and Bhupendra Chaudhary
    Citation: BMC Plant Biology 2016 16:112
  46. Growth, development, and pigment synthesis in Brassica rapa subsp. rapa cv. Tsuda, a popular vegetable crop, are influenced by light. Although microRNAs (miRNAs) have vital roles in the metabolic processes and ab...

    Authors: Bo Zhou, Pengzhen Fan, Yuhua Li, Haifang Yan and Qijiang Xu
    Citation: BMC Plant Biology 2016 16:111

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