Dewey DR. The genomic system of classification as a guide to intergeneric hybridization with the perennial Triticeae. In: Gustafson JP, editor. Gene manipulation in plant improvement. New York: Plenum Publishing Corporation; 1984. p. 209–80.
Chapter
Google Scholar
Lu BR. The genus Elymus L. in Asia. Taxonomy and biosystematics with special reference to genomic relationships. In: RRC W, Jensen KB, Jaussi C, editors. Proc 2nd intern Triticeae Symp. Logan: The Utah State University Press; 1994. p. 219–30.
Google Scholar
Yen C, Yang JL. Biosystamics on Triticeae (Poaceae), vol. 5. Beijing: Agriculture Press of China; 2013. p. 303–516.
Google Scholar
von Bothmer R, Slomon B. Triticeae: a tribe for food, feed and fun. In: Wang RRC, Jensen KB, Jaussi C, editors. Proceedings of the 2nd international Triticeae symposium. Logan: Utah State University Press; 1994. p. 1–12.
Google Scholar
Fan X, Sha LN, Dong ZZ, Zhang HQ, Kang HY, Wang Y, Wang XL, Zhang L, Ding CB, Yang RW, Zheng YL, Zhou YH. Phylogenetic relationships and Y genome origin in Elymus L. Sensu Lato (Triticeae: Poaceae) based on single-copy nuclear Acc1 and Pgk1 gene sequences. Mol Phylogenet Evol. 2013;69(3):919–28.
Article
CAS
PubMed
Google Scholar
Tzvelev NN. Tribe 3. Trticeae dumort. Poaceae URSS. Leningrad: Nauka Publishers; 1976. p. 176–89.
Google Scholar
Desvaux NB. Eustachys. Paris: Sci Soc Philom; 1810.
Google Scholar
Löve Á. Conspectus of the Triticeae. Feddes Repertorium. 1984;95(7–8):425–521.
Google Scholar
Yen C, Yang JL, Yen Y. Hitoshi Kihara, Áskell Löve and the modern genetic concept of the genera in the tribe Triticeae(Poaceae). Acta Phytotaxonomica Sin. 2005;43(1):82–93.
Article
Google Scholar
Mao PS, Huang Y, Wang XG, Meng L, Mao PC, Zhang GF. Cytological evaluation and karyotype analysis in plant germplasms of Elytrigia Desv. Agric Sci China. 2010;9(11):1553–60.
Article
CAS
Google Scholar
Zhou YH. The circumscription and genomic evolution of Elytrigia Sensu Lato (Poaceae: Triticeae). Proc 4nd wheat genomics Mol breed China. Nanjing; 2013. p. 105–6.
Cauderon Y, Saigne B. New interspecific and intergeneric hybrids involving Agropyron. Wheat Inffoem Serv. 1961;12:13–4.
Google Scholar
Dvořák J. Chromosoma differentitiation in polyploidy species of Elytrigia, with special reference to the evolution of diploidlike chromosome pairing in polyploidy species. Can J Genet Cytol. 1981;23(2):287–303.
Article
Google Scholar
McGuire PE. Chromosome pairing in triploid and tetraploid hybrids in Elytrigia (Triticeae:Poaceae). Can J Genet Cytol. 1984;26(5):519–22.
Article
Google Scholar
Wang RRC. Genomic analysis of Thinopyrum bessarabicum and T. elongatum. Can J Genet Cytol. 1985;27(6):722–8.
Article
Google Scholar
Wang RRC, Hsiao CT. Genome relationship between Thinopyrum bessarabicum and T. elongatum: revisited. Genome. 1989;32(5):802–9.
Article
Google Scholar
Liu ZW, Wang RRC. Genome analysis of Elytrigia caespitosa, Lophopyrum nodosum, Pseudoroegneria eniculate ssp. scythica, and Thinopyrum intermedium (Triticeae: Gramineae). Genome. 1993;36(1):102–11.
Article
CAS
PubMed
Google Scholar
Xu J, Conner RL. Intravarietal variation in satellites and C-banded chromosomes of Agropyron intermedium Ssp. trichophorum cv. Greenleaf. Genome. 1994;37(2):305–10.
Article
CAS
PubMed
Google Scholar
Wang RRC, von Bothmer R, Dvorak J, Fedak G, Linde-Laursen I, Muramatsu M. Genome symbolsin the Triticeae (Poaceae). In: Wang RRC, Jensen KB, Jaussi C, editors. Proceedings of the 2nd international Triticeae symposium. Utah: Utah State University; 1994. p. 29–34.
Google Scholar
Assadi M, Runemark H. Hybridization, genomic constitution, and generic delimitation in Elymus s. l. (Poaceae: Triticeae). Plant Syst Evol. 1995;194(3–4):189–205.
Article
Google Scholar
Vershinin A, Svitashev S, Gummesson PO, von Salomon B, Bothemer R, Bryngelsson T. Characterization of a family of tandemly repeated DNA sequences in Triticeae. Theor Appl Genet. 1994;89(2–3):217–25.
Article
CAS
PubMed
Google Scholar
Soltis DE, Soltis PS, Tate JA. Advances in the study of polyploidy since plant speciation. New Phytol. 2003;161(1):173–91.
Article
Google Scholar
Otto SP. The evolutionary consequences of polyploidy. Cell. 2007;131(3):452–62.
Article
CAS
PubMed
Google Scholar
Wendel JF. Genome evolution in polyploids. Plant Mol Biol. 2000;42(1):225–49.
Article
CAS
PubMed
Google Scholar
Cui L, Wall PK, Leebens-Mack JH, Lindsay BG, Soltis DE, Doyle JJ, Soltis PS, Carlson JE, Arumuganathan K, Barakat A, Albert VA, Ma H, de Pamphilis CW. Widespread genome duplications throughout the history of flowering plants. Genome Res. 2006;16(6):738–49.
Article
CAS
PubMed
PubMed Central
Google Scholar
Yan C, Sun GL. Multiple origins of allopolyploid wheatgrass Elymus caninus revealed by RPB2, PepC and TrnD/T genes. Mol Phylogenet Evol. 2012;64(3):441–51.
Article
PubMed
Google Scholar
Dong ZZ, Fan X, Sha LN, Wang Y, Zeng J, Kang HY, Zhang HQ, Wang XL, Zhang L, Ding CB, Yang RW, Zhou YH. Phylogeny and differentiation of the St genome in Elymus L. Sensu Lato (Triticeae; Poaceae) based on one nuclear DNA and two chloroplast genes. BMC Plant Biol. 2015;15(1):179–93.
Article
PubMed
PubMed Central
Google Scholar
Yan C, Sun GL, Sun DF. Distinct origin of the Y and St genome in Elymus species: evidence from the analysis of a large sample of St genome species using two nuclear genes. PLoS One. 2011;6(10):e26853.
Article
CAS
PubMed
PubMed Central
Google Scholar
Sun GL, Daley T, Ni Y. Molecular evolution and genome divergence at RPB2 gene of the St and H genome in Elymus species. Plant Mol Biol. 2007;64(6):645–55.
Article
CAS
PubMed
Google Scholar
Sun GL, Ni Y, Daley T. Molecular phylogeny of RPB2 gene reveals multiple origin, geographic differentiation of H genome, and the relationship of the Y genome to other genomes in Elymus species. Mol Phylogenet Evol. 2008;46(3):897–907.
Article
CAS
PubMed
Google Scholar
Sun GL, Pourkheirandish M, Komatsuda T. Molecular evolution and phylogeny of the RPB2 gene in the genus Hordeum. Ann Bot. 2009;103(6):975–83.
Article
CAS
PubMed
PubMed Central
Google Scholar
Fan X, Sha LN, Yang RW, Zhang HQ, Kang HY, Ding CB, Zhang L, Zheng YL, Zhou YH. Phylogeny and evolutionary history of Leymus (Triticeae; Poaceae) based on a single-copy nuclear gene encoding plastid acetyl-CoA carboxylase. BMC Evol Biol. 2009;9(1):247–57.
Article
PubMed
PubMed Central
Google Scholar
Fan X, Liu J, Sha LN, Sun GL, Hu ZQ, Zeng J, Kang HY, Zhang HQ, Wang Y, Wang XL, Zhang L, Ding CB, Yang RW, Zheng YL, Zhou YH. Evolutionary pattern of rDNA following polyploidy in Leymus (Triticeae: Poaceae). Mol Phylogenet Evol. 2014;77(1):296–306.
Article
PubMed
Google Scholar
Sha LN, Yang RW, Fan X, Wang XL, Zhou YH. Phylogenetic analysis of Leymus (Poaceae: Triticeae) inferred from nuclear rDNA ITS sequences. Biochem Genet. 2008;46(9–10):605–19.
Article
CAS
PubMed
Google Scholar
Sha LN, Fan X, Yang RW, Kang HY, Ding CB, Zhang L, Zheng YL, Zhou YH. Phylogenetic relationships between Hystrix and its closely related genera (Triticeae: Poaceae) based on nuclear ACC1, DMC1 and chloroplast trnL-F sequences. Mol Phylogenet Evol. 2010;54(2):327–35.
Article
CAS
PubMed
Google Scholar
Wang XL, Fan X, Zeng J, Sha LN, Kang HY, Kang HY, Zhang HQ, Yang RW, Zhang L, Ding CB, Zhou YH. Phylogeny and molecular evolution of the DMC1 gene within the StH genome species in Triticeae (Poaceae). Genes Genom. 2012;34:237–44.
Article
Google Scholar
Liao JQ, Loretta R, Fan X, Sha LN, Kang HY, Zhang HQ, Wang Y, Liu J, Wang XL, Yu XF, Yang RW, Ding CB, Zhang L, Zhou YH. Phylogeny and maternal donors of the tetraploid species with St genome (Poaceae: Triticeae) inferred from CoxII and ITS sequences. Biochem Syst Ecol. 2013;50(50):277–85.
Article
CAS
Google Scholar
Yang ZJ, Chen ZY, Peng ZS, Yu Y, Liao ML, Wei SH. Development of a high-density linkage map and mapping of the three-pistil gene (Pis1) in wheat using GBS markers. BMC Genomics. 2017;18(1):567–75.
Article
PubMed
PubMed Central
Google Scholar
Turktas M, Aslay M, Kaya E, Ertugrul F. Molecular characterization of phylogenetic relationships in Fritillaria species inferred from chloroplas trnL-trnF sequences. Turkish J Biol. 2012;36(5):552–60.
CAS
Google Scholar
Wendel JF, Schnabel A, Seelanan T. An unusual ribosomal DNA sequence from Gossypium gossypioides reveals ancient, cryptic, intergenomic introgression. Mol Phylogenet Evol. 1995;4(3):298–313.
Article
CAS
PubMed
Google Scholar
Liu QL, Ge S, Tang HB, Zhang XL, Zhu GF, Lu BR. Phylogenetic relationships in Elymus (Poaceae: Triticeae) based on the nuclear ribosomal internal transcribed spacer and chloroplast trnL-F sequences. New Phytol. 2006;170(2):411–20.
Article
CAS
PubMed
Google Scholar
Mahelka V, Kopecký D. Gene capture from across the grass family in the allohexaploid Elymus repens (L.) Gould (Poaceae: Triticeae) as evidenced by ITS, GBSSI, and molecular cytogenetics. Mol Biol Evol. 2010;27(6):1370–90.
Article
CAS
PubMed
Google Scholar
Kim TW, Kim JC, Fedak G, Son JH, Park KC, Kim NS. Sequence variation in ITS spacers and 5.8S rDNA and relationgship of E, St, P, ns, Xm, and H genomes in the genera of Agropyron, Elytrigia, Leymus, Pascopyrum, Psathyrostachys, and Hordeum. Genen Genom. 2010;32(5):477–85.
Article
CAS
Google Scholar
Mason-Gamer RJ, Orme NL, Anderson CM. Phylogenetic analysis of north American Elymus and the monogenomic (Poaceae: Triticeae) using three chloroplast DNA data sets. Genome. 2002;45(6):991–1002.
Article
CAS
PubMed
Google Scholar
Zhang C, Fan X, Yu HQ, Zhang L, Wang XL, Zhou YH. Different maternal genome donor to Kengyi-lia (Poaceae: Triticeae) species inferred from chloroplast trnL-F sequences. Biol Plant. 2009;53(4):759–63.
Article
CAS
Google Scholar
Luo XM, Tinker NA, Fan X, Zhang HQ, Sha LN, Kang HY, Ding CB, Liu J, Zhang L, Yang RW, Zhou YH. Phylogeny and maternal donor of Kengyilia species (Poaceae: Triticeae) based on three cpDNA (matK, rbcL and trnH-psbA) sequences. Biochem Syst Ecol. 2012;44(10):61–9.
Article
CAS
Google Scholar
Mahmoud K, Alireza B, Fatemeh S, Mohamad-Reza N, Davood A, Daniel P. Phylogenetic relationship in Fritillaria spp of Iran inferred from ribosomal ITS and chloroplast trnL-trnF sequence data. Biochem Syst Ecol. 2014;57:451–7.
Article
Google Scholar
Sha LN, Fan X, Zhang HQ, Kang HY, Wang Y, Wang XL, Zhang L, Ding CB, Yang RW, Zhou YH. Phylogenetic relationships in Leymus (Triticeae; Poaceae): evidence from chloroplast trnH-psbA and mitochondrial COXII intron sequences. J Syst Evol. 2014;52(6):722–34.
Article
Google Scholar
Doyle JJ, Doyle JL. Isolation of plant DNA from fresh tissue. Focus. 1990;12:13–5.
Google Scholar
Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994;22(22):4673–80.
Article
CAS
PubMed
PubMed Central
Google Scholar
Huelsenbeck JP, Ronquist FR. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics. 2001;17(8):754–5.
Article
CAS
PubMed
Google Scholar
Posada D, Crandall KA. Modeltest: testing the model of DNA substitution. Bioinformatics. 1998;14(9):817–8.
Article
CAS
PubMed
Google Scholar
Wang XL, Fan X, Zhang HQ, Zhang C, Sha LN, Kang HY, Yang RW, Zhang L, Ding CB, Zhou YH. Phylogeny of the StH genome species in (Triticeae:Poaceae) evidence from chloroplast trnL-F and mitochondria COX II intron sequences. Biochem Syst Ecol. 2011;39(4–6):758–65.
Article
CAS
Google Scholar
Nevski SA. Uber das system der tribe Hordeae Benth. Flora et Systematica Plantae vaeculares. Ser 1. Fasc 1, Leningrad. 1933;9–32.
Nevski SA. Tribe Hordeae Benth. In: Komarov VL, Roshevits RY, Shishkin BK, editors. Flora USSR, Leningrad, Acad Sci press USSR, vol. 2; 1934. p. 590–728.
Google Scholar
Melderis A. Elymus. In: Tutin TG, et al., editors. Floa Eueopaea, vol. 5. Cambridge: Cambridge University Press; 1980.
Google Scholar
Li D, Zhang X. Physical localization of the 18S-5.8S-26S rDNA and sequence analysis of ITS regions in Thinopyrum ponticum (Poaceae: Triticeae): implications for concerted evolution. Ann Bot. 2002;90(4):445–52.
Article
CAS
PubMed
PubMed Central
Google Scholar
Zeng J, Fan X, Sha LN, Kang HY, Zhang HQ, Liu J, Wang XL, Yang RW, Zhou YH. Nucleotide polymorphism pattern and multiple maternal origin in Thinopyrum intermedium inferred by trnH-psbA sequences. Biol Plant. 2012;56(2):254–60.
Article
Google Scholar
Hsiao C, Chatterton NJ, Asay KH, Jensen KB. Phylogenetic relationships of the monogenomic species of the wheat tribe, Triticeae (Poaceae), inferred from nuclear rDNA (internal transcribed spacer) sequences. Genome. 1995;38(2):221–3.
Article
Google Scholar
Hsiao C, Wang RRC, Dewey DR. Karyotype analysis and ganome relationships of 22 diploid species in the tribe Triticeae. Can J Genet Cytol. 1986;28(1):109–20.
Article
Google Scholar
Wang RRC. Genome relationships in the perennial Triticeae based on diploid hybrids and beyond. Hereditas. 1992;116(1–2):133–6.
Google Scholar
Zhang XQ, Yang JL, Yen C. The genome constitution of Roegneria grandis Keng et S.L. Chen (Poaceae: Triticeae). Acta Agrestia Sin. 1996;4(3):207–12.
Google Scholar
Jauhar PP. Multidisciplinary approach to genome analysisin the diploid species, Thinopyrum bassarabicum and T. elongatum (Lophoprum elongatum) of the Triticeae. Theor Appl Genet. 1990;80(4):523–36.
Article
CAS
PubMed
Google Scholar
Löve Á. IOPB chromosome number reports LXVI. Poaceae- Triticeae- Americanae. Taxon. 1980;29(1):163–9.
Google Scholar
Löve Á. Veröff. Geobot. Inst. Rübel. 1986;87:43–52.
Google Scholar
Clayton WD, Renvoize SA. Genera Gramineum. Grasses of the world. London: Royal Botanical Gardens; 1986.
Google Scholar
Frederiksen S. Taxonomic studies in Eremopyrum (Poaceae). Nord J Bot. 1991;11(3):271–85.
Article
Google Scholar
Petersen G, Seberg O. Phylogenetic analysis of the Triticeae (Poaceae) based on rpoA sequence data. Mol Phylogenet Evol. 1997;7(2):217–30.
Article
CAS
PubMed
Google Scholar
Petersen G, Seberg O. Molecular evolutiom and phylogenetic application of DMC1. Mol Biol Evol. 2002;22(1):43–50.
CAS
Google Scholar
Mason-Gamer RJ. The β-amylase genes of grasses and a phylogenetic analysis of the Triticeae (Poaceae). Am J Bot. 2005;92(6):1045–58.
Article
CAS
PubMed
Google Scholar
Wang RRC. An assessment of genome analysis based on chromosome pairing in hybrids of perennial Triticeae. Genome. 1989;32(2):179–89.
Article
Google Scholar
Seberg O, Frederiksen S. A phylogenetic analysis of the monogenomic Triticeae (Poaceae) based on morphology. Bot J Linn Soc. 2001;136(1):75–97.
Article
Google Scholar
Cassens I, Mardulyn P, Milinkovitch MC. Evaluating intraspecific “network” construction methods using simulated sequence data: do existing algorithms outperform the global maximum parsimony apprpach? Syst Biol. 2005;54(3):363–72.
Article
PubMed
Google Scholar
Posada D, Crandall KA. Selecting the best-fit model of nucleotide substitution. Syst Biol. 2001;50(4):580–601.
Article
CAS
PubMed
Google Scholar
Jakob SS, Blanttner FR. A chloroplast genealogy of Hordeum (Poaceae): long-term persisting haplotypes, incomplete lineage sorting, regional extinction, and the consequences for phylogenetic inference. Mol Biol Evol. 2006;23(8):1602–12.
Article
CAS
PubMed
Google Scholar
Kilian B, Özkan H, Deusch O, Effgen S, Brandolini A, Kohl J, Martin W, Salamini F. Independent wheat B and G genome origins in outcrossing Aegilops progenitor haplotypes. Mol Biol Evol. 2007;24(1):217–27.
Article
CAS
PubMed
Google Scholar
Redinbaugh MG, Jones TA, Zhang Y. Ubiquity of the St chloroplast genome in St-containing Triticeae polyploids. Genome. 2000;43(5):846–52.
Article
CAS
PubMed
Google Scholar
Yen C, Yang JL, Baum BR. Biosystematics of Triticeae (Vol.3). Beijing: Chinese Agriculture Press; 2006.
Google Scholar
Zeng J, Fan X, Zhang L, Wang XL, Zhang HQ, Kang HY, Zhou YH. Molecular phylogeny and mate-rnal progenitor implication in the genus Kengyilia Triticeae (Poaceae): evidence from COX II intro-n sequences. Biochem Syst Ecol. 2010;38(2):202–9.
Article
CAS
Google Scholar
Liu HT, Gao AN, Yang XM, Liu WH, Li XQ, Li LH. Intergenomic rearrangements after polyploidization of Kengyilia thoroldiana (Poaceae: Triticeae) affected by environmental factors. PLoS One. 2012;7(2):e31033.
Article
PubMed
PubMed Central
Google Scholar
Yu HQ, Fan X, Zhang C, Ding CB, Wang XL, Zhou YH. Phylogenetic relationships of species in Pseudoroegneria (Poaceae: Triticeae) and related genera inferred from nuclear rDNA ITS (internal transcribed spacer) sequences. Biologia. 2008;63(4):498–505.
Article
CAS
Google Scholar
Chen Q, Conner RL, Larche A, Thomas JB. Genome analysis of Thinopyrum intermedium and Th. ponticum using genomic in situ hybridization. Genome. 1998;41(4):580–6.
Article
CAS
PubMed
Google Scholar
Yu HQ, Zhang C, Ding CB, Wang XL, Zhang HQ, Zhou YH. Genome constitutions of Pseudoroegneria geniculata, P. geniculata Ssp. scythica and P. geniculata Ssp. pruinifera (Poaceae: Triticeae) revealed by genomic in-situ hybridization. Acta Physiol Pl. 2010;32(4):645–50.
Article
Google Scholar
Yang Y, Zhang HQ, Fan X, Sha LN, Kang HY, Wang Y, Zhou YH. Karyomorphological studies of twelve species in Elytrigia Desv. Sensu Lato (Poaceae: Triticeae). Caryologia. 2016;69(4):315–24.
Google Scholar
Wang RRC, Dewey DR, Hsiao C. Intergeneric hybrids of Agropyron and Pseudoroegneria. Bot Gaz. 1985;146(2):268–74.
Article
Google Scholar
Dewey DR. The genome structure of intermediate wheatgrass. J Hered. 1962;53(6):282–90.
Article
Google Scholar