Abugalieva S, Didorenko S, Anuarbek S, Volkova L, Gerasimova Y, Sidorik I, Turuspekov Y. Assessment of soybean flowering and seed maturation time in different latitude regions of Kazakhstan. PLoS One. 2016;11(12):1–11.
Article
Google Scholar
Didorenko SV, Zakieva AA, Sidorik IV, Abugalieva AI, Kudaibergenov MS, Iskakov AR. Diversification of crop production be means of spreading soybean to the northern regions of the Republic of Kazakhstan. Biosciences biotechnology research. Asia. 2016;13(1):23–30.
Google Scholar
Abugalieva S, Didorenko S, Anuarbek S, Volkova L, Gerasimova Y, Sidorik I, Turuspekov Y. Genotype-environment interaction patterns of soybean growing in Kazakhstan. The 1st international workshop “plant genetics nd genomics for food security” (PGGFS-2016), Novosibirsk, Russia. 2016;1.
David Grant D, Nelson RT, Cannon SB, Shoemaker RC. SoyBase, the USDA-ARS soybean genetics and genomics database. Nucleic Acids Res. 2010;38:843–6.
Article
Google Scholar
Song Q, Hyten DL, Jia G, Quigley CV, Fickus EW, Nelson RL, et al. Development and Evaluation of SoySNP50K, a High-Density Genotyping Array for Soybean. PLoS ONE. 2013; 8(1); e54985 doi:org/https://doi.org/10.1371/journal.pone.0054985.
Kan G, Zhang W, Yang W, Ma D, Zhang D, Hao D, Hu Z, Yu D. Association. Mapping of soybean seed germination under salt stress. Mol Gen Genomics. 2015;290:2147–62.
Article
CAS
Google Scholar
Zeng A, Chen P, Korth K, Hancock F, Pereira A, Brye K, Wu C, Shi A. Genome-wide association study (GWAS) of salt tolerance in worldwide soybean germplasm lines. Mol Breeding. 2017;37:30. https://doi.org/10.1007/s11032-017-0634-8.
Article
Google Scholar
Hao D, Cheng H, Yin Z, Cui S, Zhang D, Wang H, et al. Identification of single nucleotide polymorphisms and haplotypes associated with yield and yield components in soybean (Glycine max) landraces across multiple environments. Theor Appl Genet. 2012;124:447–58.
Article
CAS
PubMed
Google Scholar
Hwang EY, Song Q, Jia G, Specht JE, Hyten DL, Costa JM, et al. A genome-wide association study of seed protein and oil content in soybean. BMC Genomics. 2014;15(1) https://doi.org/10.1186/1471-2164-15-1.
Zhang J, Song Q, Cregan PB, Jiang GL. Genome-wide association study, genomic prediction and marker-assisted selection for seed weight in soybean (Glycine max). Theor Appl Genet. 2016;129:117–30.
Article
CAS
PubMed
Google Scholar
Contreras-Soto RI, Mora F, de Oliveira MAR, Higashi W, Scapim CA, Schuster I. A genome-wide association study for agronomic traits in soybean using SNP markers and SNP based haplotype analysis. PLoS One. 2017;12(2) https://doi.org/10.1371/journal.pone.0171105.
Wallace GJ, Zhang X, Beyene Y, Semagn K, Olsen M, Prasanna BM, Buckler ES. Genome-wide Association for Plant Height and Flowering Time across 15 tropical maize populations under managed drought stress and well-watered conditions in sub-Saharan Africa. Crop Sci. 2016;56(5):2365–78.
Article
Google Scholar
Bandillo N, Jarquin D, Song Q, Nelson R, Cregan P, Specht J, Lorenz AA. Population structure and genome-wide association analysis on the USDA soybean Germplasm collection. The Plant Genome. 2015;8(3)
Niu Y, Xu Y, Liu XF, Yang SX, Wei SP, Xie FT, Zhang YM. Association mapping for seed size and shape traits in soybean cultivars. Mol Breeding. 2013;31:785–94.
Article
CAS
Google Scholar
Wen Z, Boyse JF, Song Q, Cregan PB, Wang D. Genomic consequences of selection and genome-wide association mapping in soybean. BMC Genomics. 2015;16:671. https://doi.org/10.1186/s12864–015–1872-y.
Article
PubMed
PubMed Central
Google Scholar
Sonah H, O’Donoughue L, Cober E, Rajcan I, Belzile F. Identification of loci governing eight agronomic traits using a GBS-GWAS approach and validation by QTL mapping in soya bean. Plant Biotechnol J. 2015;13:211–21.
Article
CAS
PubMed
Google Scholar
Wang H, Smith KP, Combs E, Blake T, Horsley RD, Muehlbauer GJ. Effect of population size and unbalanced data sets on QTL detection using genome-wide association mapping in barley breeding germplasm. Theor Appl Genet 2012;124:111–124.
Wang J, Chu S, Zhang H, Zhu Y, Cheng H, Deyue Y. Development and application of a novel genome-wide SNP array reveals domestication history in soybean. Sci Rep. 2016;6(20728):1–10.
Google Scholar
Myles S, Peiffer J, Brown P, Ersoz E, Zhang Z, Costich D, Buckler E. Association mapping: critical considerations shift from genotyping to experimental design. Plant Cell. 2009;21(8):2194–202.
Article
CAS
PubMed
PubMed Central
Google Scholar
Turner MK, Kolmer JA, Pumphrey MO, Bulli P, Chao S, Anderson JA. Association mapping of leaf rust resistance loci in a spring wheat core collection. Theor Appl Genet. 2016;doi https://doi.org/10.1007/s00122-016-2815-y.
Tsubokura Y, Watanabe S, Xia Z, Kanamori H. Yamagata, Kaga a, et al. natural variation in the genes responsible for maturity loci E1, E2, E3 and E4 in soybean. Ann Bot. 2014;113:429–41.
Article
CAS
PubMed
Google Scholar
Watanabe S, Hideshima R, Xia Z, Tsubokura Y, Sato S, Nakamoto Y, et al. Map-based cloning of the gene associated with the soybean locus E3. Genetics. 2009;182:1251–62.
Article
CAS
PubMed
PubMed Central
Google Scholar
Watanabe S, Xia Z, Hideshima R, Tsubokura Y, Sato S, Yamanaka N, et al. A map-based cloning strategy employing a residual heterozygous line reveals that the GIGANTEA gene is involved in soybean maturity and flowering. Genetics. 2011;188(2):395–407.
Article
CAS
PubMed
PubMed Central
Google Scholar
Schmutz J, Cannon SB, Schlueter J, Ma J, Mitros T, Nelson W, et al. Genome sequence of the palaeopolyploid soybean. Nature. 2010;463:178–83.
Article
CAS
PubMed
Google Scholar
Peakall R, Smouse PE. GenAlEx 6.5: genetic analysis in excel. Population genetic software for teaching and research – an update. Bioinformatics. 2012;28:2537–9.
Article
CAS
PubMed
PubMed Central
Google Scholar
Evanno G, Regnaut S, Goudet J. Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol. 2005;14:2611–20.
Article
CAS
PubMed
Google Scholar
Bradbury PJ, Zhang Z, Kroon DE, Casstevens TM, Ramdoss Y, Buckler ESTASSEL. Software for association mapping of complex traits in diverse samples. Bioinformatics. 2007;23:2633–5.
Article
CAS
PubMed
Google Scholar