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Table 4 Identified candidate genes for GNS in wheat from the Pubing3228/Jing4839 RIL population

From: Genetic insights into superior grain number traits: a QTL analysis of wheat-Agropyron cristatum derivative pubing3228

Noa

Chromosome

Identified loci

in current study

Position (bp)b

Candidate genes (closest/nearby)

Annotation

1

4A

AX-108908317

679194458

TraesCS4A01G601800

4-hydroxybenzoate octaprenyltransferase

2

5D

AX-108803037

27452078

TraesCS5D01G044000

60S ribosomal protein l28

3

5D

AX-108803037

31475580

TraesCS5D01G051000

Senescence-associated protein

4

5D

AX-110591185

32303148

TraesCS5D01G033700

YABBY transcription factor

5

7D

AX-108759691

29882930

TraesCS7D01G056100

S-adenosylmethionine decarboxylase proenzyme

6

7D

AX-108759691

32673051

TraesCS7D01G060100

Cysteine protease

7

7D

AX-110520245

35599225

TraesCS7D01G064300

Starch synthase

8

7D

AX-110826147

65750064

TraesCS7D01G109200

GDSL esterase/lipase

9

7D

AX-108748734

74057072

TraesCS7D01G148000

Senescence-associated protein

10

7D

AX-108748734

72522918

TraesCS7D01G117600

Ethylene-responsive transcription factor

11

7D

AX-108748734

72216910

TraesCS7D01G117100

Histone H3

  1. NoteaThe number of candidate genes for wheat grain Fe concentration. bPhysical position of the SNP as reported in the IWGSC Chinese Spring reference genome RefSeq v2.0