Table 1 Number of Illumina iSelect 90 K SNP markers assigned to wheat chromosomes according to two IWGSC RefSeq genome assemblies
Homoeologous group | 90K_Refv1 | 90K_Refv2 | ||||||
|---|---|---|---|---|---|---|---|---|
Subgenome | Total | Subgenome | Total | |||||
A | B | D | A | B | D | |||
1 | 2802 | 3340 | 2373 | 8515 | 2804 | 3319 | 2361 | 8484 |
2 | 3299 | 4718 | 2834 | 10,851 | 3323 | 4682 | 2827 | 10,832 |
3 | 2696 | 3060 | 2007 | 7763 | 2686 | 3078 | 2015 | 7779 |
4 | 2421 | 2172 | 1427 | 6020 | 2424 | 2176 | 1473 | 6073 |
5 | 2849 | 3546 | 2307 | 8702 | 2837 | 3515 | 2308 | 8660 |
6 | 2614 | 2796 | 1810 | 7220 | 2616 | 2786 | 1864 | 7266 |
7 | 3099 | 2665 | 2261 | 8025 | 3096 | 2676 | 2267 | 8039 |
Total | 19,780 | 22,297 | 15,019 | 57,096 | 19,786 | 22,232 | 15,115 | 57,133 |
Unknown | 755 | 57,851 | 265 | 57,398 | ||||