Table 4 DEGs under Zn deficiency and/or Zn resupply that are potential targets of Zn-responsive miRNAs
From: Integrated analyses of miRNAome and transcriptome reveal zinc deficiency responses in rice seedlings
miRNA | miRNA response to Zn | Potential target | Target description | Target response to Zn |
|---|---|---|---|---|
osa-miR171g-5p | -Zn up | Os05g0278500 | Transferase family protein | -Zn up |
osa-miR397b-5p | Zn resupply up | Os03g0273200 | LACCASE 11 | -Zn up |
| Â | Â | Os12g0258700 | LACCASE 29 | Zn resupply down |
osa-miR398a-5p | -Zn up, Zn resupply down | Os07g0213800 | Similar to Allergenic protein | -Zn down |
osa-miR528-5p | -Zn up | Os06g0154200 | Similar to F-box/LRR-repeat MAX2 homolog | -Zn up |
nov-miR1 | Zn resupply down | Os08g0107800 | Pentatricopeptide repeat domain containing protein | Zn resupply down |
nov-miR4 | Zn resupply down | Os01g0358700 | – | Zn resupply up |
nov-miR6 | -Zn down | Os04g0623901 | Non-protein coding transcript | -Zn up |
nov-miR23 | -Zn down | Os06g0505501 | Non-protein coding transcript | -Zn down, Zn resupply up |
| Â | Â | Os01g0923900 | Cyclin-like F-box domain containing protein | Zn resupply down |
nov-miR26 | -Zn down | Os11g0684700 | Similar to NB-ARC domain containing protein | Zn resupply up |
nov-miR38 | -Zn up, Zn resupply down | Os04g0304400 | Similar to MADS-box protein AGL16-II | -Zn up, Zn resupply down |