Skip to main content

Table 4 Sampling of genes known to regulate the expression of MS1 in Arabidopsis and identified ortholog expression in papaya flower buds

From: Differential gene expression among three sex types reveals a MALE STERILITY 1 (CpMS1) for sex differentiation in papaya

Gene IDDescriptionAnther development stageLogCPMFlower bud size from 1 to 6 mmFlower bud size from 7 to 12 mm
Male vs. FemaleMale vs. HermaphroditeHermaphrodite vs. FemaleMale vs. FemaleMale vs. HermaphroditeHermaphrodite vs. Female
FC*FDR*FC*FDR*FC*FDR*FC*FDR*FC*FDR*FC*FDR*
evm.model.supercontig_43.78MADS BOX Protein SEPALLATA 3 (SEP3)Stamen initiation7.581.393.50E-01−1.357.26E-011.874.22E-021.265.28E-01−1.159.94E-011.452.26E-01
evm.model.supercontig_26.309Leucine-rich receptor-like protein kinase CLAVATA 1 (CLV1)4.111.792.88E-011.091.00E+ 001.644.48E-012.255.35E-02−1.091.00E+ 002.452.94E-02
evm.model.supercontig_26.316Floral homeotic protein PISTILLATA (PI)6.991.834.97E-03−1.171.00E+ 002.141.44E-032.801.39E-041.305.57E-012.161.03E-03
evm.model.supercontig_6.199Floral homeotic protein APETALA 3 (AP3) isoform 18.011.662.51E-021.041.00E+ 001.605.06E-023.954.91E-061.781.36E-022.221.28E-04
evm.model.supercontig_6.202Floral homeotic protein APETALA 3 (AP3) isoform 27.191.226.76E-01−1.191.00E+ 001.451.63E-012.236.88E-051.373.54E-011.622.98E-02
evm.model.supercontig_12.16Transcription factor Sporocyteless/Nozzle (SPL/NZZ)Archesporial initiation2.34188.338.27E-051.101.00E+ 00171.971.09E-0426.518.87E-04−3.252.58E-0186.261.45E-04
evm.model.supercontig_107.30Leucine-rich repeat receptor kinase EMS1/EXS-likeTapetal cell fate specification5.01−1.444.14E-01−1.359.00E-01−1.079.93E-01−2.362.15E-02−1.445.70E-01−1.631.90E-01
evm.model.supercontig_14.179Leucine-rich repeat receptor-like Serine/Threonine-protein kinase RPK26.43−2.071.61E-031.091.00E+ 00−2.259.85E-04−1.922.85E-03−1.021.00E+ 00− 1.874.01E-03
evm.model.supercontig_4.154Protein Tapetum Determinant 1 (TPD1)2.511.259.65E-011.141.00E+ 001.109.99E-01−3.351.33E-01−4.001.19E-011.199.63E-01
evm. TU.contig_28309.2Transcription factor DEFECTIVE IN TAPETAL DEVELOPMENT AND FUNCTION 1 (TDF1)Tapetal development7.891145.317.53E-051.559.49E-01736.601.19E-041449.317.86E-05−2.152.99E-013114.346.33E-05
evm.model.supercontig_871.3Transcription factor DYSFUNCTIONAL TAPETUM (DYT)1.4531.935.98E-04−1.961.00E+ 0062.656.06E-0524.862.45E-034.122.93E-016.031.93E-01
evm.model.supercontig_20.95Transcription factor ABORTED MICROSPORES-like (AMS) isoform 1Microspore maturation8.441408.476.82E-051.291.00E+ 001088.999.40E-05312.191.36E-04−3.397.89E-021057.127.73E-05
evm.model.supercontig_20.94Transcription factor ABORTED MICROSPORES-like (AMS) isoform 24.43102.165.66E-042.612.58E-0139.183.61E-037461.295.04E-051.893.61E-013941.349.67E-05