Park SO, Zheng Z, Oppenheimer DG, Hauser BA. The PRETTY FEW SEEDS2 gene encodes an Arabidopsis homeodomain protein that regulates ovule development. Development. 2005;132(4):841–9.
Article
CAS
PubMed
Google Scholar
Shimizu R, Ji JB, Kelsey E, Ohtsu K, Schnable PS, Scanlon MJ. Tissue specificity and evolution of meristematic WOX3 function. Plant Physiol. 2009;149(2):841–50.
Article
CAS
PubMed
Google Scholar
Breuninger H, Rikirsch E, Hermann M, Ueda M, Laux T. Differential expression of WOX genes mediates apical-basal axis formation in the Arabidopsis embryo. Dev Cell. 2008;14(6):867–76.
Article
CAS
PubMed
Google Scholar
Suer S, Agusti J, Sanchez P, Schwarz M, Greb T. WOX4 imparts auxin responsiveness to cambium cells in Arabidopsis. Plant Cell. 2011;23(9):3247–59.
Article
CAS
PubMed
Google Scholar
Hirakawa Y, Kondo Y, Fukuda H. TDIF peptide signaling regulates vascular stem cell proliferation via the WOX4 homeobox gene in Arabidopsis. Plant Cell. 2010;22(8):2618–29.
Article
CAS
PubMed
PubMed Central
Google Scholar
Stahl Y, Wink RH, Ingram GC, Simon R. A signaling module controlling the stem cell niche in Arabidopsis root meristems. Curr Biol. 2009;19(11):909–14.
Article
CAS
PubMed
Google Scholar
Sarkar AK, Luijten M, Miyashima S, Lenhard M, Hashimoto T, Nakajima K, Scheres B, Heidstra R, Laux T. Conserved factors regulate signalling in Arabidopsis thaliana shoot and root stem cell organizers. Nature. 2007;446(7137):811–4.
Article
CAS
PubMed
Google Scholar
Ji J, Strable J, Shimizu R, Koenig D, Sinha N, Scanlon MJ. WOX4 promotes procambial development. Plant Physiol. 2010;152(3):1346–56.
Article
PubMed
PubMed Central
Google Scholar
Haecker A, Gross-Hardt R, Geiges B, Sarkar A, Breuninger H, Herrmann M, Laux T. Expression dynamics of WOX genes mark cell fate decisions during early embryonic patterning in Arabidopsis thaliana. Development. 2004;131(3):657–68.
Article
CAS
PubMed
Google Scholar
Costanzo E, Trehin C, Vandenbussche M. The role of WOX genes in flower development. Ann Bot-London. 2014;114(7):1545–53.
Article
CAS
Google Scholar
Zhang Y, Wu R, Qin G, Chen Z, Gu H, Qu LJZDB. Over-expression of WOX1 leads to defects in meristem development and polyamine homeostasis in Arabidopsis. J Integr Plant Biol. 2011;53(6):493–506.
Article
CAS
PubMed
Google Scholar
Vandenbussche M, Horstman A, Zethof J, Koes R, Rijpkema AS, Gerats T. Differential recruitment of WOX transcription factors for lateral development and organ fusion in Petunia and Arabidopsis. Plant Cell. 2009;21(8):2269–83.
Article
CAS
PubMed
Google Scholar
Liu M, Lei L, Miao F, Powers C, Zhang X, Deng J, Tadege M, Carver BF, Yan L. The STENOFOLIA gene from Medicago alters leaf width, flowering time and chlorophyll content in transgenic wheat. Plant Biotechnol J. 2018;16(1):186–96.
Article
CAS
PubMed
Google Scholar
Nakata M, Matsumoto N, Tsugeki R, Rikirsch E, Laux T, Okada K. Roles of the middle domain-specific WUSCHEL-RELATED HOMEOBOX genes in early development of leaves in Arabidopsis. Plant Cell. 2012;24(2):519–35.
Article
CAS
PubMed
Google Scholar
Lin H, Niu L, McHale NA, Ohme-Takagi M, Mysore KS, Tadege M. Evolutionarily conserved repressive activity of WOX proteins mediates leaf blade outgrowth and floral organ development in plants. Proc Natl Acad Sci U S A. 2013;110(1):366–71.
Article
CAS
PubMed
Google Scholar
Ji J, Shimizu R, Sinha N, Scanlon MJ. Analyses of WOX4 transgenics provide further evidence for the evolution of the WOX gene family during the regulation of diverse stem cell functions. Plant Signal Behav. 2010;5(7):916–20.
Article
CAS
PubMed
PubMed Central
Google Scholar
Yasui Y, Ohmori Y, Takebayashi Y, Sakakibara H, Hirano HY. WUSCHEL- RELATED HOMEOBOX4 acts as a key regulator in early leaf development in rice. PLoS Genet. 2018;14(4):e1007365.
Article
PubMed
PubMed Central
Google Scholar
Lopez-Moya F, Escudero N, Zavala-Gonzalez EA, Esteve-Bruna D, Blázquez MA, Alabadí D, Lopez-Llorca LV. Induction of auxin biosynthesis and WOX5 repression mediate changes in root development in Arabidopsis exposed to chitosan. Sci Rep. 2017;7(1):16813.
Article
PubMed
PubMed Central
Google Scholar
Li J, Zhang J, Jia H, Liu B, Sun P, Hu J, Wang L, Lu M. The WUSCHEL-related homeobox 5a (PtoWOX5a) is involved in adventitious root development in poplar. Tree Physiol. 2018;38(1):139–53.
Article
CAS
PubMed
Google Scholar
Xu M, Xie W, Huang M. Two WUSCHEL-related HOMEOBOX genes, PeWOX11a and PeWOX11b, are involved in adventitious root formation of poplar. Physiol Plant. 2015;155(4):446–56.
Article
CAS
PubMed
Google Scholar
Cheng S, Tan F, Lu Y, Liu X, Li T, Yuan W, Zhao Y, Zhou DX. WOX11 recruits a histone H3K27me3 demethylase to promote gene expression during shoot development in rice. Nucleic Acids Res. 2018;46(5):2356–69.
Article
CAS
PubMed
PubMed Central
Google Scholar
Cheng S, Huang Y, Zhu N, Zhao Y. The rice WUSCHEL-related homeobox genes are involved in reproductive organ development, hormone signaling and abiotic stress response. Gene. 2014;549(2):266–74.
Article
CAS
PubMed
Google Scholar
Cheng S, Zhou DX, Zhao Y. WUSCHEL-related homeobox gene WOX11 increases rice drought resistance by controlling root hair formation and root system development. Plant Signal Behav. 2016;11(2):e1130198.
Article
PubMed
Google Scholar
Ruan YL, Llewellyn DJ, Furbank RT. The control of single-celled cotton fiber elongation by developmentally reversible gating of plasmodesmata and coordinated expression of sucrose and K+ transporters and expansin. Plant Cell. 2001;13(1):47–60.
CAS
PubMed
PubMed Central
Google Scholar
Kim HJ, Triplett BA. Cotton fiber growth in planta and in vitro. Models for plant cell elongation and cell wall biogenesis. Plant Physiol. 2001;127(4):1361–6.
Article
CAS
PubMed
PubMed Central
Google Scholar
Qin YM, Zhu YX. How cotton fibers elongate: a tale of linear cell-growth mode. Curr Opin Plant Biol. 2011;14(1):106–11.
Article
CAS
PubMed
Google Scholar
Li FG, Fan GY, Wang KB, Sun FM, Yuan YL, Song GL, Li Q, Ma ZY, Lu CR, Zou CS, et al. Genome sequence of the cultivated cotton Gossypium arboreum. Nat Genet. 2014;46(6):567–72.
Article
CAS
PubMed
Google Scholar
Wang KB, Wang ZW, Li FG, Ye WW, Wang JY, Song GL, Yue Z, Cong L, Shang HH, Zhu SL, et al. The draft genome of a diploid cotton Gossypium raimondii. Nat Genet. 2012;44(10):1098–103.
Article
CAS
PubMed
Google Scholar
Li FG, Fan GY, Lu CR, Xiao GH, Zou CS, Kohel RJ, Ma ZY, Shang HH, Ma XF, Wu JY, et al. Genome sequence of cultivated upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution. Nat Biotechnol. 2015;33(5):524–U242.
Article
PubMed
Google Scholar
Zhang TZ, Hu Y, Jiang WK, Fang L, Guan XY, Chen JD, Zhang JB, Saski CA, Scheffler BE, Stelly DM, et al. Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement. Nat Biotechnol. 2015;33(5):531–7.
Article
CAS
PubMed
Google Scholar
Du X, Huang G, He S, Yang Z, Sun G, Ma X, Li N, Zhang X, Sun J, Liu M, et al. Resequencing of 243 diploid cotton accessions based on an updated a genome identifies the genetic basis of key agronomic traits. Nat Genet. 2018;50(6):796–802.
Article
CAS
PubMed
Google Scholar
Chen ZJ, Scheffler BE, Dennis E, Triplett BA, Zhang TZ, Guo WZ, Chen XY, Stelly DM, Rabinowicz PD, Town CD, et al. Toward sequencing cotton (Gossypium) genomes. Plant Physiol. 2007;145(4):1303–10.
Article
CAS
PubMed
Google Scholar
Wendel JF. New World tetraploid cottons contain old world cytoplasm. Proc Natl Acad Sci U S A. 1989;86(11):4132–6.
Article
CAS
PubMed
Google Scholar
Wang XY, Guo H, Wang JP, Lei TY, Liu T, Wang ZY, Li YX, Lee TH, Li JP, Tang HB, et al. Comparative genomic de-convolution of the cotton genome revealed a decaploid ancestor and widespread chromosomal fractionation. New Phytol. 2016;209(3):1252–63.
Article
CAS
PubMed
Google Scholar
Nardmann J, Reisewitz P, Werr W. Discrete shoot and root stem cell-promoting WUS/WOX5 functions are an evolutionary innovation of angiosperms. Mol Biol Evol. 2009;26(8):1745–55.
Article
CAS
PubMed
Google Scholar
Yang Z, Gong Q, Qin W, Yang Z, Cheng Y, Lu L, Ge X, Zhang C, Wu Z, Li F. Genome-wide analysis of WOX genes in upland cotton and their expression pattern under different stresses. BMC Plant Biol. 2017;17(1):113.
Article
PubMed
Google Scholar
Deveaux Y, Toffano-Nioche C, Claisse G, Thareau V, Morin H, Laufs P, Moreau H, Kreis M, Lecharny A. Genes of the most conserved WOX clade in plants affect root and flower development in Arabidopsis. BMC Evol Biol. 2008;8:291.
Article
PubMed
Google Scholar
Nardmann J, Werr W. The invention of WUS-like stem cell-promoting functions in plants predates leptosporangiate ferns. Plant Mol Biol. 2012;78(1):123–34.
Article
CAS
PubMed
Google Scholar
Nardmann J, Werr W. The shoot stem cell niche in angiosperms: expression patterns of WUS orthologues in rice and maize imply major modifications in the course of mono- and dicot evolution. Mol Biol Evol. 2006;23(12):2492–504.
Article
CAS
PubMed
Google Scholar
Liu B, Wang L, Zhang J, Li J, Zheng H, Chen J, Lu M. WUSCHEL-related Homeobox genes in Populus tomentosa: diversified expression patterns and a functional similarity in adventitious root formation. BMC Genomics. 2014;15:296.
Article
PubMed
PubMed Central
Google Scholar
Sakakibara K, Reisewitz P, Aoyama T, Friedrich T, Ando S, Sato Y, Tamada Y, Nishiyama T, Hiwatashi Y, Kurata T, et al. WOX13-like genes are required for reprogramming of leaf and protoplast cells into stem cells in the moss Physcomitrella patens. Development. 2014;141(8):1660–70.
Article
CAS
PubMed
Google Scholar
Sun XD, Xiang N, Wang CD, Yang SH, Li X, Yang YQ, Yang YP. Isolation and functional analysis of SpWOX13 from Stipa purpurea. Plant Mol Biol Rep. 2015;33(5):1441–50.
Article
CAS
Google Scholar
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol. 2013;30(12):2725–9.
Article
CAS
PubMed
PubMed Central
Google Scholar
Hu B, Jin J, Guo AY, Zhang H, Luo J, Gao G. GSDS 2.0: an upgraded gene feature visualization server. Bioinformatics. 2015;31(8):1296–7.
Article
PubMed
Google Scholar
Quevillon E, Silventoinen V, Pillai S, Harte N, Mulder N, Apweiler R, Lopez R. InterProScan: protein domains identifier. Nucleic Acids Res. 2005;33(Web Server):W116–20.
Article
CAS
PubMed
PubMed Central
Google Scholar
Shi YH, Zhu SW, Mao XZ, Feng JX, Qin YM, Zhang L, Cheng J, Wei LP, Wang ZY, Zhu YX. Transcriptome profiling, molecular biological, and physiological studies reveal a major role for ethylene in cotton fiber cell elongation. Plant Cell. 2006;18:651–64.
Article
CAS
PubMed
PubMed Central
Google Scholar
Livak KJ, Schmittgen TD. Analysis of relative gene expression data using real-time quantitative PCR and the 2−ΔΔCT method. Methods. 2001;25(4):402–8.
Article
CAS
PubMed
Google Scholar