Kuusipalo J. Factors affecting the fruiting of bilberries: an analysis of categorical data set. Plant Ecol. 1988;76:71–7.
Google Scholar
Dahlgren J, Oksanen L, Sjödin M, Olofsson J. Interactions between gray-sided voles (Clethrionomys rufucanus) and bilberry (Vaccinium myrtillus), their main winter food plant. Oecologia. 2007;152:525–32.
Article
PubMed
Google Scholar
Hegland SJ, Jongejans E, Rydgren K. Investigating the interaction between ungulate grazing and resource effects on Vaccinium myrtillus populations with integral projection models. Oecologia. 2010;163:695–706.
Article
PubMed
Google Scholar
Hjälten J, Danell K, Ericson L. Hare and vole browsing preferences during winter. Acta Theriol. 2004;49:53–62.
Article
Google Scholar
Jacquemart AL. Floral visitors of Vaccinium species in the high Ardennes. Belgium Flora. 1993;188:263–73.
Article
Google Scholar
Selås V. Autumn population size of capercaillie Tetrao urogallus in relation to bilberry Vaccinium myrtillus production and weather: an analysis of Norwegian game reports. Wildlife Biol. 2001;7:17–25.
Article
Google Scholar
Wegge P, Olstad T, Gregersen H, Hjeljord O, Sivkov AV. Capercaillie broods in pristine boreal forest in northwestern Russia: the importance of insects and cover in habitat selection. Can J Zool. 2005;83:1547–55.
Article
Google Scholar
Welch CA, Keay J, Kendall KC, Robbins CT. Constraints on frugivory by bears. Ecology. 1997;78:1105–19.
Article
Google Scholar
Canter PH, Ernst E. Anthocyanosides of Vaccinium myrtillus (bilberry) for night vision-a systematic review of placebo-controlled trials. Surv Ophthalmol. 2004;49:38–50.
Article
PubMed
Google Scholar
Ghosh D, Konishi T. Anthocyanins and anthocyanin-rich extracts: role in diabetes and eye function. Asia Pac J Clin Nutr. 2007;16:200–8.
CAS
PubMed
Google Scholar
Jaakola L, Määttä K, Pirttilä AM, Törrönen R, Kärenlampi S, Hohtola A. Expression of genes involved in anthocyanin biosynthesis in relation to anthocyanin, proanthocyanidin, and flavonol levels during bilberry fruit development. Plant Physiol. 2002;130:729–39.
Article
CAS
PubMed
PubMed Central
Google Scholar
Macel M, Vrieling K. Pyrrolizidine alkaloids as oviposition stimulants for the cinnabar moth, Tyria jacobaeae. J Chem Ecol. 2003;29:1435–46.
Article
CAS
PubMed
Google Scholar
Nieminen M, Suomi J, Van Nouhuys S, Sauri P, Riekkola ML. Effect of iridoid glycoside content on oviposition host plant choice and parasitism in a specialist herbivore. J Chem Ecol. 2003;29:823–44.
Article
CAS
PubMed
Google Scholar
Dicke M, Vet LEM. Plant-Carnivore Interactions: Evolutionary and Ecological Consequences for Plant, Herbivore and Carnivore. In: Olff H, Brown VK, Drent RH, editors. Herbivores between Plants and Predators. London: Blackwell Science; 1999. p. 483–520.
Google Scholar
Paré PW, Tumlinson JH. Plant volatiles as a defense against insect herbivores. Plant Physiol. 1999;121:325–32.
Article
PubMed
PubMed Central
Google Scholar
Pauwels L, Inzé D, Goossens A. Jasmonate-inducible gene: what does it mean? Trends Plant Sci. 2009;14:87–91.
Article
CAS
PubMed
Google Scholar
Baldwin IT. Inducible nicotine production in native Nicotiana as an example of adaptive phenotypic plasticity. J Chem Ecol. 1999;25:3–30.
Article
CAS
Google Scholar
Van Dam NM, Baldwin IT. Competition mediates costs of jasmonate-induced defences, nitrogen acquisition and transgenerational plasticity in Nicotiana attenuata. Funct Ecol. 2001;15:406–15.
Article
Google Scholar
Yang S, Wu H, Xie J, Rantala MJ. Depressed performance and detoxification enzyme activities of Helicoverpa armigera fed with conventional cotton foliage subjected to methyl jasmonate exposure. Entomol Exp Appl. 2013;147:186–95.
Article
CAS
Google Scholar
Hegland SJ, Seldal T, Lilleeng MS, Rydgren K. Can browsing by deer in winter induce defence responses in bilberry (Vaccinium myrtillus)? Ecol Res. 2016;31:441–8.
Article
CAS
Google Scholar
Seldal T, Hegland SJ, Rydgren K, Rodriguez-Saona C, Töpper JP. How to induce defense responses in wild plant populations? Using bilberry (Vaccinium myrtillus) as example. Ecol Evol. 2017;7:1762–9.
Article
PubMed
PubMed Central
Google Scholar
Benevenuto R, Hegland SJ, Töpper JP, Rydgren K, Moe SR, Rodriguez-Saona C, Seldal T. Multiannual effects of induced plant defenses: are defended plants good or bad neighbors? Ecol Evol. 2018;8:8940–50.
Article
PubMed
PubMed Central
Google Scholar
Mayrose M, Kane NC, Mayrose I, Dlugosch KM, Rieseberg LH. Increased growth in sunflower correlates with reduced defences and altered gene expression in response to biotic and abiotic stress. Molec Ecol. 2011;20:4683–94.
Article
Google Scholar
Mitra S, Baldwin IT. RuBPCase activase (RCA) mediates growth–defense trade-offs: silencing RCA redirects jasmonic acid (JA) flux from JA-isoleucine to methyl jasmonate (MeJA) to attenuate induced defense responses in Nicotiana attenuata. New Phytol. 2014;201:1385–95.
Article
CAS
PubMed
Google Scholar
Yang F, Zhang Y, Huang Q, Yin G, Pennerman KK, Yu J, Liu Z, Li D, Guo A. Analysis of key genes of jasmonic acid mediated signal pathway for defense against insect damages by comparative transcriptome sequencing. Sci Rep. 2015;5:16500.
Article
CAS
PubMed
PubMed Central
Google Scholar
Kunkel BN, Brooks DM. Cross talk between signaling pathways in pathogen defense. Curr Opin Plant Biol. 2002;5:325–31.
Article
CAS
PubMed
Google Scholar
Lackman P, González-Guzmán M, Tilleman S, Carqueijeiro I, Pérez AC, Moses T, Seo M, Kanno Y, Häkkinen ST, Van Montagu MC. Jasmonate signaling involves the abscisic acid receptor PYL4 to regulate metabolic reprogramming in Arabidopsis and tobacco. Proc Natl Acad Sci U S A. 2011;108:5891–6.
Article
CAS
PubMed
PubMed Central
Google Scholar
Norman-Setterblad C, Vidal S, Palva ET. Interacting signal pathways control defense gene expression in Arabidopsis in response to cell wall-degrading enzymes from Erwinia carotovora. Mol Plant-Microbe Interact. 2000;13:430–8.
Article
CAS
PubMed
Google Scholar
Penninckx IA, Thomma BP, Buchala A, Métraux J-P, Broekaert WF. Concomitant activation of jasmonate and ethylene response pathways is required for induction of a plant defensin gene in Arabidopsis. Plant Cell. 1998;10:2103–13.
Article
CAS
PubMed
PubMed Central
Google Scholar
Schenk PM, Kazan K, Wilson I, Anderson JP, Richmond T, Somerville SC, Manners JM. Coordinated plant defense responses in Arabidopsis revealed by microarray analysis. Proc Natl Acad Sci U S A. 2000;97:11655–60.
Article
CAS
PubMed
PubMed Central
Google Scholar
Xu Y, Chang P-FL, Liu D, Narasimhan ML, Raghothama KG, Hasegawa PM, Bressan RA. Plant defense genes are synergistically induced by ethylene and methyl jasmonate. Plant Cell. 1994;6:1077–85.
Article
CAS
PubMed
PubMed Central
Google Scholar
Thaler JS, Humphrey PT, Whiteman NK. Evolution of jasmonate and salicylate signal crosstalk. Trends Plant Sci. 2012;17:260–70.
Article
CAS
PubMed
Google Scholar
Lu J, Ju H, Zhou G, Zhu C, Erb M, Wang X, Wang P, Lou Y. An EAR-motif-containing ERF transcription factor affects herbivore-induced signaling, defense and resistance in rice. Plant J. 2011;68:583–96.
Article
CAS
PubMed
Google Scholar
Blilou I, Xu J, Wildwater M, Willemsen V, Paponov I, Friml J, Heidstra R, Aida M, Palme K, Scheres B. The PIN auxin efflux facilitator network controls growth and patterning in Arabidopsis roots. Nature. 2005;433(7021):39.
Article
CAS
PubMed
Google Scholar
Rahman A, Bannigan A, Sulaman W, Pechter P, Blancaflor EB, Baskin TI. Auxin, actin and growth of the Arabidopsis thaliana primary root. Plant J. 2007;50:514–28.
Article
CAS
PubMed
Google Scholar
Stepanova AN, Robertson-Hoyt J, Yun J, Benavente LM, Xie D-Y, Doležal K, Schlereth A, Jürgens G, Alonso JM. TAA1-mediated auxin biosynthesis is essential for hormone crosstalk and plant development. Cell. 2008;133:177–91.
Article
CAS
PubMed
Google Scholar
Yan S, Zhang T, Dong S, McLamore ES, Wang N, Shan X, Shen Y, Wan Y. MeJA affects root growth by modulation of transmembrane auxin flux in the transition zone. J Plant Growth Regul. 2016;35:256–65.
Article
CAS
Google Scholar
Niki T, Mitsuhara I, Seo S, Ohtsubo N, Ohashi Y. Antagonistic effect of salicylic acid and jasmonic acid on the expression of pathogenesis-related (PR) protein genes in wounded mature tobacco leaves. Plant Cell Physiol. 1998;39:500–7.
Article
CAS
Google Scholar
Vidal S, León IP, Denecke J, Palva ET. Salicylic acid and the plant pathogen Erwinia carotovora induce defense genes via antagonistic pathways. Plant J. 1997;11:115–23.
Article
CAS
Google Scholar
Felton G, Korth K, Bi J, Wesley S, Huhman D, Mathews M, Murphy J, Lamb C, Dixon R. Inverse relationship between systemic resistance of plants to microorganisms and to insect herbivory. Curr Biol. 1999;9:317–20.
Article
CAS
PubMed
Google Scholar
Feys BJ, Parker JE. Interplay of signaling pathways in plant disease resistance. Trends Genet. 2000;16:449–55.
Article
CAS
PubMed
Google Scholar
Reymond P, Farmer EE. Jasmonate and salicylate as global signals for defense gene expression. Curr Opin Plant Biol. 1998;1:404–11.
Article
CAS
PubMed
Google Scholar
Thomma BP, Penninckx IA, Cammue BP, Broekaert WF. The complexity of disease signaling in Arabidopsis. Curr Opin Immunol. 2001;13:63–8.
Article
CAS
PubMed
Google Scholar
Cheong JJ, Choi YD. Methyl jasmonate as a vital substance in plants. Trends Genet. 2003;19:409–13.
Article
CAS
PubMed
Google Scholar
De Geyter N, Gholami A, Goormachtig S, Goossens A. Transcriptional machineries in jasmonate-elicited plant secondary metabolism. Trends Plant Sci. 2012;17:349–59.
Article
PubMed
CAS
Google Scholar
Gundlach H, Müller MJ, Kutchan TM, Zenk MH. Jasmonic acid is a signal transducer in elicitor-induced plant cell cultures. Proc Natl Acad Sci U S A. 1992;89:2389–93.
Article
CAS
PubMed
PubMed Central
Google Scholar
Sun G, Yang Y, Xie F, Wen J-F, Wu J, Wilson IW, Tang Q, Liu H, Qiu D. Deep sequencing reveals transcriptome re-programming of Taxus x media cells to the elicitation with methyl jasmonate. PLoS One. 2013;8:e62865.
Article
CAS
PubMed
PubMed Central
Google Scholar
Zhao J, Davis LC, Verpoorte R. Elicitor signal transduction leading to production of plant secondary metabolites. Biotechnol Adv. 2005;23:283–333.
Article
CAS
PubMed
Google Scholar
Lattanzio V, Lattanzio VM, Cardinali A. Role of phenolics in the resistance mechanisms of plants against fungal pathogens and insects. Phytochemistry: Advances in research. 2006;661:23–67.
Google Scholar
Ehlenfeldt MK, Prior RL. Oxygen radical absorbance capacity (ORAC) and phenolic and anthocyanin concentrations in fruit and leaf tissues of highbush blueberry. J Agric Food Chem. 2001;49:2222–7.
Article
CAS
PubMed
Google Scholar
Prior R, Cao G, Martin A, Sofic E, McEwen J, O'Brien C, Lischner N, Ehlenfeldt M, Kalt W, Krewer G, et al. Antioxidant capacity as influenced by total phenolic and anthocyanin content, maturity, and variety of Vaccinium species. J Agric Food Chem. 1998;46:2686–93.
Article
CAS
Google Scholar
Smith MAL, Marley KA, Seigler D, Singletary KW, Meline B. Bioactive properties of wild blueberry fruits. J Food Sci. 2000;65:352–6.
Article
CAS
Google Scholar
Li Y, Baldauf S, Lim EK, Bowles DJ. Phylogenetic analysis of the UDP-glycosyltransferase multigene family of Arabidopsis thaliana. J Biol Chem. 2001;276:4338–43.
Article
CAS
PubMed
Google Scholar
Stretch AW. Occurence and control of Glomerella cingulata on highbush blueberry. Plant Dis Rep. 1967;51:401–4.
CAS
Google Scholar
Yamazaki M, Yamagishi E, Gong Z, Fukuchi-Mizutani M, Fukui Y, Tanaka Y, Kusumi T, Yamaguchi M, Saito K. Two flavonoid glucosyltransferases from Petunia hybrida: molecular cloning, biochemical properties and developmentally regulated expression. Plant Mol Biol. 2002;48:401–11.
Article
CAS
PubMed
Google Scholar
Ferreyra MLF, Rius SP, Casati P. Flavonoids: biosynthesis, biological functions, and biotechnological applications. Front Plant Sci. 2012;3:222.
Google Scholar
Samac DA, Graham MA. Recent advances in legume-microbe interactions: recognition, defense response, and symbiosis from a genomic perspective. Plant Physiol. 2007;144:582–7.
Article
CAS
PubMed
PubMed Central
Google Scholar
Hoffmann L, Besseau S, Geoffroy P, Ritzenthaler C, Meyer D, Lapierre C, Pollet B, Legrand M. Silencing of hydroxycinnamoyl-coenzyme a shikimate/quinate hydroxycinnamoyltransferase affects phenylpropanoid biosynthesis. Plant Cell. 2004;16:1446–65.
Article
CAS
PubMed
PubMed Central
Google Scholar
Vassão DG, Gang DR, Koeduka T, Jackson B, Pichersky E, Davin LB, Lewis NG. Chavicol formation in sweet basil (Ocimum basilicum): cleavage of an esterified C9 hydroxyl group with NAD (P) H-dependent reduction. Org Biomol Chem. 2006;4:2733–44.
Article
PubMed
Google Scholar
Trabucco GM, Matos DA, Lee SJ, Saathoff AJ, Priest HD, Mockler TC, Sarath G, Hazen SP. Functional characterization of cinnamyl alcohol dehydrogenase and caffeic acid O-methyltransferase in Brachypodium distachyon. BMC Biotechnol. 2013;13:61.
Article
CAS
PubMed
PubMed Central
Google Scholar
Hamann T, Bennett M, Mansfield J, Somerville C. Identification of cell-wall stress as a hexose-dependent and osmosensitive regulator of plant responses. Plant J. 2009;57:1015–26.
Article
CAS
PubMed
Google Scholar
Sarkanen KV, Ludwig CH. Eds. Lignins. Occurrence, formation, structure, and reactions. New York: Wiley-Interscience; 1971.
Google Scholar
Li ST, Zhang P, Zhang M, Fu C, Zhao C, Dong Y, Guo A, Yu L. Transcriptional profile of Taxus chinensis cells in response to methyl jasmonate. BMC Genomics. 2012;13.
Tzin V, Galili G. The biosynthetic pathways for shikimate and aromatic amino acids in Arabidopsis thaliana. Arabidopsis Book. 2010;8:e0132.
Article
PubMed
PubMed Central
Google Scholar
Lopukhina A, Dettenberg M, Weiler EW, Holländer-Czytko H. Cloning and characterization of a coronatine-regulated tyrosine aminotransferase from Arabidopsis. Plant Physiol. 2001;126:1678–87.
Article
CAS
PubMed
PubMed Central
Google Scholar
Sandorf I, Holländer-Czytko H. Jasmonate is involved in the induction of tyrosine aminotransferase and tocopherol biosynthesis in Arabidopsis thaliana. Planta. 2002;216:173–9.
Article
CAS
PubMed
Google Scholar
Noctor G, Mhamdi A, Chaouch S, Han YI, Neukermans J, Marquez-Garcia B, Queval G, Foyer CH. Glutathione in plants: an integrated overview. Plant Cell Env. 2012;35:454–84.
Article
CAS
Google Scholar
Dron M, Clouse SD, Dixon RA, Lawton MA, Lamb CJ. Glutathione and fungal elicitor regulation of a plant defense gene promoter in electroporated protoplasts. Proc Natl Acad Sci U S A. 1988;85:6738–42.
Article
CAS
PubMed
PubMed Central
Google Scholar
Edwards R, Blount JW, Dixon RA. Glutathione and elicitation of the phytoalexin response in legume cell cultures. Planta. 1991;184:403–9.
Article
CAS
PubMed
Google Scholar
Edwards MD, Helentjaris T, Wright S, Stuber CW. Molecular-marker-facilitated investigations of quantitative trait loci in maize. Theor Appl Genet. 1992;83:765–74.
Article
CAS
PubMed
Google Scholar
May MJ, Hammond-Kosack KE, Jones JD. Involvement of reactive oxygen species, glutathione metabolism, and lipid peroxidation in the Cf-gene-dependent defense response of tomato cotyledons induced by race-specific elicitors of Cladosporium fulvum. Plant Physiol. 1996;110:1367–79.
Article
CAS
PubMed
PubMed Central
Google Scholar
Koornneef A, Leon-Reyes A, Ritsema T, Verhage A, Den Otter FC, Van Loon LC, Pieterse CM. Kinetics of salicylate-mediated suppression of jasmonate signaling reveal a role for redox modulation. Plant Physiol. 2008;147:1358–68.
Article
CAS
PubMed
PubMed Central
Google Scholar
Mateo A, Funck D, Mühlenbock P, Kular B, Mullineaux PM, Karpinski S. Controlled levels of salicylic acid are required for optimal photosynthesis and redox homeostasis. J Exp Bot. 2006;57:1795–807.
Article
CAS
PubMed
Google Scholar
Mou Z, Fan W, Dong X. Inducers of plant systemic acquired resistance regulate NPR1 function through redox changes. Cell. 2003;113:935–44.
Article
CAS
PubMed
Google Scholar
Dixon DP, Hawkins T, Hussey PJ, Edwards R. Enzyme activities and subcellular localization of members of the Arabidopsis glutathione transferase superfamily. J Exp Bot. 2009;60:1207–18.
Article
CAS
PubMed
PubMed Central
Google Scholar
Wagner U, Edwards R, Dixon DP, Mauch F. Probing the diversity of the Arabidopsis glutathione S-transferase gene family. Plant Molec Biol. 2002;49:515–32.
Article
CAS
Google Scholar
Xiang C, Oliver DJ. Glutathione metabolic genes coordinately respond to heavy metals and jasmonic acid in Arabidopsis. Plant Cell. 1998;10:1539–50.
Article
CAS
PubMed
PubMed Central
Google Scholar
Sasaki-Sekimoto Y, Taki N, Obayashi T, Aono M, Matsumoto F, Sakurai N, Suzuki H, Hirai MY, Noji M, Saito K, et al. Coordinated activation of metabolic pathways for antioxidants and defence compounds by jasmonates and their roles in stress tolerance in Arabidopsis. Plant J. 2005;44:653–68.
Article
CAS
PubMed
Google Scholar
Nagegowda DA. Plant volatile terpenoid metabolism: biosynthetic genes, transcriptional regulation and subcellular compartmentation. FEBS Lett. 2010;584:2965–73.
Article
CAS
PubMed
Google Scholar
Birkett MA, Al Abassi S, Kröber T, Chamberlain K, Hooper AM, Guerin PM, Pettersson J, Pickett JA, Slade R, Wadhams LJ. Antiectoparasitic activity of the gum resin, gum haggar, from the east African plant, Commiphora holtziana. Phytochemistry. 2008;69:1710–5.
Article
CAS
PubMed
Google Scholar
Bruce TJ, Wadhams LJ, Woodcock CM. Insect host location: a volatile situation. Trends Plant Sci. 2005;10:269–74.
Article
CAS
PubMed
Google Scholar
Kiran SR, Devi PS, Reddy KJ. Bioactivity of essential oils and sesquiterpenes of Chloroxylon swietenia DC against Helicoverpa armigera. Curr Sci. 2007:544–8.
Bülow N, König WA. The role of germacrene D as a precursor in sesquiterpene biosynthesis: investigations of acid catalyzed, photochemically and thermally induced rearrangements. Phytochemistry. 2000;55:141–68.
Article
PubMed
Google Scholar
Telascrea M, de Araújo CC, Marques MO, Facanali R, de Moraes PL, Cavalheiro AJ. Essential oil from leaves of Cryptocarya mandioccana Meisner (Lauraceae): composition and intraspecific chemical variability. Biochem Syst Ecol. 2007;35:222–32.
Article
CAS
Google Scholar
Jang K, Lee HG, Jung S-J, Paek N-C, Seo PJ. The E3 ubiquitin ligase COP1 regulates thermosensory flowering by triggering GI degradation in Arabidopsis. Sci Rep. 2015;5:12071.
Article
PubMed
PubMed Central
Google Scholar
Deng X-W, Matsui M, Wei N, Wagner D, Chu AM, Feldmann KA, Quail PH. COP1, an Arabidopsis regulatory gene, encodes a protein with both a zinc-binding motif and a Gβ homologous domain. Cell. 1992;71:791–801.
Article
CAS
PubMed
Google Scholar
Liu L-J, Zhang Y-C, Li Q-H, Sang Y, Mao J, Lian H-L, Wang L, Yang H-Q. COP1-mediated ubiquitination of CONSTANS is implicated in cryptochrome regulation of flowering in Arabidopsis. Plant Cell. 2008;20:292–306.
Article
CAS
PubMed
PubMed Central
Google Scholar
McNellis TW, Torii KU, Deng X-W. Expression of an N-terminal fragment of COP1 confers a dominant-negative effect on light-regulated seedling development in Arabidopsis. Plant Cell. 1996;8:1491–503.
Article
CAS
PubMed
PubMed Central
Google Scholar
Liu XL, Covington MF, Fankhauser C, Chory J, Wagner DR. ELF3 encodes a circadian clock–regulated nuclear protein that functions in an Arabidopsis PHYB signal transduction pathway. Plant Cell. 2001;13:1293–304.
Article
CAS
PubMed
PubMed Central
Google Scholar
An H, Roussot C, Suárez-López P, Corbesier L, Vincent C, Piñeiro M, Hepworth S, Mouradov A, Justin S, Turnbull C. CONSTANS acts in the phloem to regulate a systemic signal that induces photoperiodic flowering of Arabidopsis. Development. 2004;131:3615–26.
Article
CAS
PubMed
Google Scholar
Yu J-W, Rubio V, Lee N-Y, Bai S, Lee S-Y, Kim S-S, Liu L, Zhang Y, Irigoyen ML, Sullivan JA. COP1 and ELF3 control circadian function and photoperiodic flowering by regulating GI stability. Mol Cell. 2008;32:617–30.
Article
CAS
PubMed
PubMed Central
Google Scholar
Hicks KA, Albertson TM, Wagner DR. EARLY FLOWERING3 encodes a novel protein that regulates circadian clock function and flowering in Arabidopsis. Plant Cell. 2001;13:1281–92.
Article
CAS
PubMed
PubMed Central
Google Scholar
Kim W-Y, Hicks KA, Somers DE. Independent roles for EARLY FLOWERING 3 and ZEITLUPE in the control of circadian timing, hypocotyl length, and flowering time. Plant Physiol. 2005;139:1557–69.
Article
CAS
PubMed
PubMed Central
Google Scholar
Alabadi D, Yanovsky MJ, Mas P, Harmer SL, Kay SA. Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis. Curr Biol. 2002;12:757–61.
Article
CAS
PubMed
Google Scholar
Green R, Tobin E. Loss of the circadian clock-associated protein 1 in Arabidopsis results in altered clock-regulated gene expression. Proc Natl Acad Sci U S A. 1999;96:4176–9.
Article
CAS
PubMed
PubMed Central
Google Scholar
Mizoguchi T, Wheatley K, Hanzawa Y, Wright L, Mizoguchi M, Song H-R, Carré IA, Coupland G. LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis. Dev Cell. 2002;2:629–41.
Article
CAS
PubMed
Google Scholar
Agrawal AA, Johnson MT, Hastings AP, Maron JL. A field experiment demonstrating plant life-history evolution and its eco-evolutionary feedback to seed predator populations. Am Nat. 2013;181(S1):S35–45.
Article
PubMed
Google Scholar
Parachnowitsch AL, Caruso CM. Predispersal seed herbivores, not pollinators, exert selection on floral traits via female fitness. Ecology. 2008;89:1802–10.
Article
PubMed
Google Scholar
Chehab EW, Yao C, Henderson Z, Kim S, Braam J. Arabidopsis touch-induced morphogenesis is jasmonate mediated and protects against pests. Curr Biol. 2012;22:701–6.
Article
CAS
PubMed
Google Scholar
Song S, Qi T, Huang H, Xie D. Regulation of stamen development by coordinated actions of jasmonate, auxin, and gibberellin in Arabidopsis. Mol Plant. 2013;6:1065–73.
Article
CAS
PubMed
Google Scholar
Diallo AO, Agharbaoui Z, Badawi MA, Ali-Benali MA, Moheb A, Houde M, Sarhan F. Transcriptome analysis of an mvp mutant reveals important changes in global gene expression and a role for methyl jasmonate in vernalization and flowering in wheat. J Exp Bot. 2014;65:2271–86.
Article
CAS
PubMed
PubMed Central
Google Scholar
Karban R, Yang LH, Edwards KF. Volatile communication between plants that affects herbivory: a meta-analysis. Ecol Lett. 2014;17:44–52.
Article
PubMed
Google Scholar
Rodriguez-Saona CR, Polashock J, Malo EA. Jasmonate-mediated induced volatiles in the American cranberry Vaccinium macrocarpon: from gene expression to organismal interactions. Front Plant Sci. 2013;4:115.
Article
PubMed
PubMed Central
Google Scholar
Jung C, Lyou SH, Yeu S, Kim MA, Rhee S, Kim M, Lee JS, Do Choi Y, Cheong J-J. Microarray-based screening of jasmonate-responsive genes in Arabidopsis thaliana. Plant Cell Rep. 2007;26:1053–63.
Article
CAS
PubMed
Google Scholar
Sasaki Y, Asamizu E, Shibata D, Nakamura Y, Kaneko T, Awai K, Amagai M, Kuwata C, Tsugane T, Masuda T. Monitoring of methyl jasmonate-responsive genes in Arabidopsis by cDNA macroarray: self-activation of jasmonic acid biosynthesis and crosstalk with other phytohormone signaling pathways. DNA Res. 2001;8:153–61.
Article
CAS
PubMed
Google Scholar
Chen Q, Sun J, Zhai Q, Zhou W, Qi L, Xu L, Wang B, Chen R, Jiang H, Qi J. The basic helix-loop-helix transcription factor MYC2 directly represses PLETHORA expression during jasmonate-mediated modulation of the root stem cell niche in Arabidopsis. Plant Cell. 2011;23:3335–52.
Article
CAS
PubMed
PubMed Central
Google Scholar
Zhai Q, Li C-B, Zheng W, Wu X, Zhao J, Zhou G, Jiang H, Sun J, Lou Y, Li C. Phytochrome chromophore deficiency leads to overproduction of jasmonic acid and elevated expression of jasmonate-responsive genes in Arabidopsis. Plant Cell Physiol. 2007;48:1061–71.
Article
CAS
PubMed
Google Scholar
Wierstra I, Kloppstech K. Differential effects of methyl jasmonate on the expression of the early light-inducible proteins and other light-regulated genes in barley. Plant Physiol. 2000;124:833–44.
Article
CAS
PubMed
PubMed Central
Google Scholar
Reinbothe S, Reinbothe C, Parthier B. Methyl jasmonate-regulated translation of nuclear-encoded chloroplast proteins in barley (Hordeum vulgare L. cv. salome). J Biol Chem. 1993;268:10606–11.
CAS
PubMed
Google Scholar
Reinbothe S, Reinbothe C, Parthier B. Methyl jasmonate represses translation initiation of a specific set of mRNAs in barley. Plant J. 1993;4:459–67.
Article
CAS
Google Scholar
Weidhase R, Lehmann J, Kramell H, Sembdner G, Parthier B. Degradation of ribulose-1, 5-bisphosphate carboxylase and chlorophyll in senescing barley leaf segments triggered by jasmonic acid methylester, and counteraction by cytokinin. Physiol Plant. 1987;69:161–6.
Article
CAS
Google Scholar
Cheng Z, Sun L, Qi T, Zhang B, Peng W, Liu Y, Xie D. The bHLH transcription factor MYC3 interacts with the jasmonate ZIM-domain proteins to mediate jasmonate response in Arabidopsis. Mol Plant. 2011;4:279–88.
Article
CAS
PubMed
Google Scholar
Sánchez-Sampedro A, Kim HK, Choi YH, Verpoorte R, Corchete P. Metabolomic alterations in elicitor treated Silybum marianum suspension cultures monitored by nuclear magnetic resonance spectroscopy. J Biotechnol. 2007;130:133–42.
Article
PubMed
CAS
Google Scholar
Broeckling CD, Huhman DV, Farag MA, Smith JT, May GD, Mendes P, Dixon RA, Sumner LW. Metabolic profiling of Medicago truncatula cell cultures reveals the effects of biotic and abiotic elicitors on metabolism. J Exp Bot. 2004;56:323–36.
Article
PubMed
CAS
Google Scholar
Frenkel M, Külheim C, Jänkänpää HJ, Skogström O, Dall'Osto L, Ågren J, Bassi R, Moritz T, Moen J, Jansson S. Improper excess light energy dissipation in Arabidopsis results in a metabolic reprogramming. BMC Plant Biol. 2009;9:12.
Article
PubMed
PubMed Central
CAS
Google Scholar
Beltrano J, Ronco M, Montaldi E, Carbone A. Senescence of flag leaves and ears of wheat hastened by methyl jasmonate. J Plant Growth Regul. 1998;17:53–7.
Article
CAS
Google Scholar
Rossato L, MacDuff J, Laine P, Le Deunff E, Ourry A. Nitrogen storage and remobilization in Brassica napus L. during the growth cycle: effects of methyl jasmonate on nitrate uptake, senescence, growth, and VSP accumulation. J Exp Bot. 2002;53:1131–41.
Article
CAS
PubMed
Google Scholar
Gómez S, Ferrieri RA, Schueller M, Orians CM. Methyl jasmonate elicits rapid changes in carbon and nitrogen dynamics in tomato. New Phytol. 2010;188:835–44.
Article
PubMed
CAS
Google Scholar
Bernard SM, Habash DZ. The importance of cytosolic glutamine synthetase in nitrogen assimilation and recycling. New Phytol. 2009;182:608–20.
Article
CAS
PubMed
Google Scholar
Makino A, Nakano H, Mae T, Shimada T, Yamamoto N. Photosynthesis, plant growth and N allocation in transgenic rice plants with decreased Rubisco under CO2 enrichment. J Exp Bot. 2000;51(suppl_1):383–9.
Article
CAS
PubMed
Google Scholar
Makino A, Sakuma H, Sudo E, Mae T. Differences between maize and rice in N-use efficiency for photosynthesis and protein allocation. Plant Cell Physiol. 2003;44:952–6.
Article
CAS
PubMed
Google Scholar
Nunes-Nesi A, Fernie AR, Stitt M. Metabolic and signaling aspects underpinning the regulation of plant carbon nitrogen interactions. Mol Plant. 2010;3:973–96.
Article
CAS
PubMed
Google Scholar
Stewart CN, Via LE. A rapid CTAB DNA isolation technique useful for RAPD fingerprinting and other PCR applications. BioTechniques. 1993;5:748–50.
Google Scholar
Grabherr MG, Haas BJ, Yassour M, Levin JZ, Thompson DA, Amit I, Adiconis X, Fan L, Raychowdhury R, Zeng Q, et al. Full-length transcriptome assembly from RNA-Seq data without a reference genome. Nature Biotechnol. 2011;29:644–52.
Article
CAS
Google Scholar
Götz S, García-Gómez JM, Terol J, Williams TD, Nagaraj SH, Nueda MJ, Robles M, Talón M, Dopazo J, Conesa A. High-throughput functional annotation and data mining with the Blast2GO suite. Nucleic Acids Res. 2008;36:3420–35.
Article
PubMed
PubMed Central
CAS
Google Scholar
Davidson NM, Oshlack A. Corset: enabling differential gene expression analysis for de novo assembled transcriptomes. Genome Biol. 2014;15:410.
PubMed
PubMed Central
Google Scholar
Li B, Dewey CN. RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome. BMC Bioinformatics. 2011;12:323.
Article
CAS
PubMed
PubMed Central
Google Scholar
Anders S, Huber W. Differential expression analysis for sequence count data. Genome Biol. 2010;11:R106.
Article
CAS
PubMed
PubMed Central
Google Scholar