Table 3 Genes exhibiting > 4-fold change in transcript abundance in 100 mM NaCl treated ABR17 transgenic seedlings
From: Transcriptional profiling of pea ABR17 mediated changes in gene expression in Arabidopsis thaliana
AGIa | Operon annotation | Gene mean | SEb | p Value |
|---|---|---|---|---|
Transcription factors | ||||
At5g43650 | bHLH protein family | 4.67 | 0.51 | 1.22E-02 |
At1g43160 | AP2 domain transcription factor RAP2.6 | 4.52 | 0.5 | 1.22E-02 |
At3g15500 | ATNAC3 (Arabidopsis NAC domain containing protein 55) | 3.8 | 0.28 | 8.39E-04 |
At1g10585 | Transcription factor | 3.32 | 0.2 | 4.55E-04 |
At3g43180 | zinc finger (C3HC4-type RING finger) protein family | 3.06 | 0.6 | 7.05E-03 |
At1g21910 | AP2 domain-containing transcription factor family protein | 3.01 | 0.04 | 2.66E-07 |
At1g52890 | ANAC019 (Arabidopsis NAC domain containing protein 19) | 2.96 | 0.46 | 7.40E-03 |
At5g13330 | RAP2.6L (Related to AP2 6L) | 2.86 | 0.11 | 1.33E-05 |
At4g05100 | ATMYB74 (MYB domain protein 74) | 2.53 | 0.29 | 3.21E-03 |
At2g38340 | AP2 domain transcription factor, putative (DREB2) | 2.4 | 0.27 | 3.08E-03 |
At2g46680 | ATHB-7 (Arabidopsis thaliana HOMEOBOX 7) | 2.16 | 0.02 | 9.75E-07 |
At2g38470 | WRKY family transcription factor | 2.05 | 0.21 | 1.75E-04 |
At4g17460 | HAT1 (HOMEOBOX-leucine zipper protein 1) | -2.15 | 0.26 | 3.96E-04 |
At2g33810 | SPL3 (SQUAMOSA PROMOTER binding protein-like3) | -2.22 | 0.54 | 2.55E-02 |
At1g62360 | STM (shoot meristemless) | -2.76 | 0.35 | 1.44E-03 |
Stress response | ||||
At2g03760 | Steroid sulfotransferase | 3.71 | 0.1 | 3.35E-06 |
At5g43570 | Serine protease inhibitor family protein | 3.57 | 0.09 | 2.85E-06 |
At4g04220 | Disease resistance family protein | 3.43 | 0.16 | 2.40E-04 |
At4g37990 | Mannitol dehydrogenase (ELI3-2), putative | 2.85 | 0.48 | 1.96E-03 |
At4g11650 | Osmotin-like protein (OSM34) | 2.36 | 0.17 | 3.95E-05 |
At5g39580 | Peroxidase, putative | 2.32 | 0.32 | 5.27E-03 |
At2g33380 | RD20 (Responsive to dessication 20) | 2.22 | 0.27 | 4.30E-04 |
At5g59820 | Zinc finger protein | 2.19 | 0.52 | 8.55E-03 |
At2g02990 | Ribonuclease, RNS1 | 2.13 | 0.1 | 2.94E-05 |
At1g08830 | Copper/zinc superoxidase dismutase (CSD1) | 2.09 | 0.18 | 8.11E-05 |
At5g42180 | Peroxidase, putative | -2.22 | 0.54 | 1.45E-02 |
At4g18780 | CESA8 (Cellulase synthase 8) | -2.34 | 0.1 | 1.52E-04 |
At3g22231 | PCC1 (Pathogen and circadian controlled 1) | -2.5 | 0.42 | 1.95E-03 |
At2g11810 | MGDG synthase (MGD3), putative | -2.66 | 0.1 | 1.12E-04 |
At1g23130 | Bet v I allergen family | -3.48 | 0.16 | 4.19E-06 |
At4g14400 | ACD6 (Accelerated cell death 6) | -4.33 | 0.97 | 2.12E-02 |
Carbohydrate and cell wall metabolism | ||||
At4g25810 | Xyloglucan endotransglycosylase (XTR-6) | 4.68 | 0.19 | 1.53E-04 |
At3g60140 | Glycosyl hydrolase family 1 protein | 4.19 | 0.1 | 3.46E-05 |
At2g36780 | UDP-glycosyltransferase family | 2.87 | 0.12 | 1.75E-04 |
At2g43620 | Glycosyl hydrolase family 19 (chitinase) | 2.81 | 0.4 | 9.08E-04 |
At4g16260 | Glycosyl hydrolase family 17 | 2.49 | 0.11 | 2.06E-04 |
At4g26530 | Fructose-bisphosphate aldolase, putative | -2 | 0.14 | 3.06E-05 |
At4g02290 | Glycosyl hydrolase family 9 | -2.22 | 0.25 | 3.11E-04 |
Electron transport & Oxidoreductase | ||||
At2g37770 | Aldo/keto reductase family | 3.05 | 0.11 | 1.02E-05 |
At1g30700 | FAD-linked oxidoreductase family | 2.58 | 0.21 | 1.14E-03 |
At5g05600 | Oxidoreductase, 2OG-Fe(II) oxygenase family | 2.42 | 0.33 | 5.06E-03 |
At1g17020 | SRG1 (Senescence-related gene 1) | 2.26 | 0.08 | 1.35E-06 |
At2g45570 | Cytochrome p450 family | 2.11 | 0.34 | 8.70E-03 |
At5g20230 | Arabidopsis blue-copper-binding protein | 2.1 | 0.11 | 6.36E-06 |
Lipid metabolism | ||||
At5g14180 | Lipase family protein | 2.78 | 0.45 | 1.59E-03 |
At1g54010 | Myrosinase-associated protein, putative | 2.24 | 0.69 | 4.77E-02 |
At3g02040 | SRG3 (Senescense related gene 3) | -2.66 | 0.16 | 1.24E-05 |
Protein and amino acid metabolism | ||||
At3g25250 | Protein kinase family | 2.54 | 0.38 | 6.62E-03 |
At4g04490 | Protein kinase family protein | 2.51 | 0.79 | 4.96E-02 |
At4g08870 | Arginase – related | 2.45 | 0.1 | 2.31E-06 |
At1g26970 | Protein kinase, putative | 2.39 | 0.09 | 1.50E-06 |
At1g76600 | Similar to unknown protein (Arabidopsis thaliana) | 2 | 0.58 | 2.59E-02 |
At1g21270 | Protein serine/threonine kinase | -2.06 | 0.24 | 3.37E-04 |
At1g65800 | ARK2 ((Arabidopsis receptor kinase 2) | -2.33 | 0.17 | 1.73E-04 |
At4g10540 | Subtilase family protein | -2.36 | 0.07 | 5.74E-06 |
At4g21640 | Subtilase family protein | -2.45 | 0.34 | 2.04E-03 |
At4g21650 | Subtilase family protein | -2.49 | 0.65 | 3.13E-02 |
Transport | ||||
At2g38530 | Protease inhibitor/lipid transfer protein (LTP) family | 3.91 | 0.16 | 2.35E-06 |
At4g12500 | Protease inhibitor/lipid transfer protein (LTP) family | 3.34 | 0.28 | 7.67E-05 |
At4g12490 | Protease inhibitor/lipid transfer protein (LTP) family | 3.32 | 0.29 | 9.06E-05 |
At3g50930 | AAA-type ATPase family | 3 | 0.19 | 1.86E-05 |
At4g12470 | Protease inhibitor/lipid transfer protein (LTP) family | 2.8 | 0.29 | 1.88E-04 |
At2g04070 | MATE efflux protein family | 2.67 | 0.31 | 3.24E-03 |
At5g43610 | ATSUC6 (Sucrose-proton symporter 6) | 2.5 | 0.33 | 6.37E-04 |
At3g51860 | Cation exchanger, putative (CAX3) | 2.2 | 0.24 | 2.64E-03 |
At2g04080 | MATE efflux protein – related | 2.1 | 0.32 | 1.17E-03 |
At4g12480 | Protease inhibitor/lipid transfer protein (LTP) family | 2.09 | 0.23 | 2.45E-04 |
At4g21680 | Peptide transporter – like protein | 2.03 | 0.76 | 4.41E-02 |
At5g19530 | Spermine synthase (ACL5) | -2.02 | 0.14 | 2.72E-05 |