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Table 1 Functional classification of sequenced AFLP and MSAP variant bands in calli and/or regenerants

From: Tissue culture-induced genetic and epigenetic alterations in rice pure-lines, F1 hybrids and polyploids

Category (Based on BlastX)

Number and (%) of variant

Number and (%) of variant

 

AFLP bands

MSAP bands

Known-function gene

2 (2.3)

1 (1.5)

Putative protein-coding gene

44 (51.2)

23 (34.3)

Transposon and retrotransposon

4 (4.7)

3 (4.5)

No similarity

36 (41.9)

40 (59.7)

Total

86 (100)

67 (100)