Bartel DP: MicroRNAs: genomics, biogenesis, mechanism, and function. Cell. 2004, 116 (2): 281-297. 10.1016/S0092-8674(04)00045-5.
Article
PubMed
CAS
Google Scholar
Meister G, Tuschl T: Mechanisms of gene silencing by double-stranded RNA. Nature. 2004, 431 (7006): 343-349. 10.1038/nature02873.
Article
PubMed
CAS
Google Scholar
Zhang B, Stellwag EJ, Pan X: Large-scale genome analysis reveals unique features of microRNAs. Gene. 2009, 443 (1–2): 100-109.
Article
PubMed
CAS
Google Scholar
Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC: miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii. Nature. 2007, 447 (7148): 1126-1129. 10.1038/nature05903.
Article
PubMed
CAS
Google Scholar
Jian X, Zhang L, Li G, Wang X, Cao X, Fang X, Chen F: Identification of novel stress-regulated microRNAs from Oryza sativa L. Genomics. 2010, 95 (1): 47-55. 10.1016/j.ygeno.2009.08.017.
Article
PubMed
CAS
Google Scholar
Li B, Qin Y, Duan H, Yin W, Xia X: Genome-wide characterization of new and drought stress responsive microRNAs in Populus euphratica. J Exp Bot. 2011, 62 (11): 3765-3779. 10.1093/jxb/err051.
Article
PubMed
CAS
PubMed Central
Google Scholar
Sunkar R, Zhu JK: Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis. Plant Cell. 2004, 16 (8): 2001-2019. 10.1105/tpc.104.022830.
Article
PubMed
CAS
PubMed Central
Google Scholar
Aukerman MJ, Sakai H: Regulation of flowering time and floral organ identity by a MicroRNA and its APETALA2-like target genes. Plant Cell. 2003, 15 (11): 2730-2741. 10.1105/tpc.016238.
Article
PubMed
CAS
PubMed Central
Google Scholar
Chiou TJ, Lin SI: Signaling network in sensing phosphate availability in plants. Annu Rev Plant Biol. 2011, 62: 185-206. 10.1146/annurev-arplant-042110-103849.
Article
PubMed
CAS
Google Scholar
Lu S, Sun YH, Chiang VL: Stress-responsive microRNAs in Populus. Plant J. 2008, 55 (1): 131-151. 10.1111/j.1365-313X.2008.03497.x.
Article
PubMed
CAS
Google Scholar
Palatnik JF, Allen E, Wu X, Schommer C, Schwab R, Carrington JC, Weigel D: Control of leaf morphogenesis by microRNAs. Nature. 2003, 425 (6955): 257-263. 10.1038/nature01958.
Article
PubMed
CAS
Google Scholar
Covarrubias AA, Reyes JL: Post-transcriptional gene regulation of salinity and drought responses by plant microRNAs. Plant Cell Environ. 2010, 33 (4): 481-489. 10.1111/j.1365-3040.2009.02048.x.
Article
PubMed
CAS
Google Scholar
Jia X, Ren L, Chen QJ, Li R, Tang G: UV-B-responsive microRNAs in Populus tremula. J Plant Physiol. 2009, 166 (18): 2046-2057. 10.1016/j.jplph.2009.06.011.
Article
PubMed
CAS
Google Scholar
Zuo J, Wang Y, Liu H, Ma Y, Ju Z, Zhai B, Fu D, Zhu Y, Luo Y, Zhu B: MicroRNAs in tomato plants. Sci China Life Sci. 2011, 54 (7): 599-605. 10.1007/s11427-011-4188-4.
Article
PubMed
CAS
Google Scholar
Sunkar R, Jagadeeswaran G: In silico identification of conserved microRNAs in large number of diverse plant species. BMC Plant Biol. 2008, 8: 37. 10.1186/1471-2229-8-37.
Article
PubMed
PubMed Central
Google Scholar
Zhao B, Liang R, Ge L, Li W, Xiao H, Lin H, Ruan K, Jin Y: Identification of drought-induced microRNAs in rice. Biochem Biophys Res Commun. 2007, 354 (2): 585-590. 10.1016/j.bbrc.2007.01.022.
Article
PubMed
CAS
Google Scholar
Ding D, Zhang L, Wang H, Liu Z, Zhang Z, Zheng Y: Differential expression of miRNAs in response to salt stress in maize roots. Ann Bot. 2009, 103 (1): 29-38.
Article
PubMed
CAS
PubMed Central
Google Scholar
Liu HH, Tian X, Li YJ, Wu CA, Zheng CC: Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana. RNA. 2008, 14 (5): 836-843. 10.1261/rna.895308.
Article
PubMed
CAS
PubMed Central
Google Scholar
Lv DK, Bai X, Li Y, Ding XD, Ge Y, Cai H, Ji W, Wu N, Zhu YM: Profiling of cold-stress-responsive miRNAs in rice by microarrays. Gene. 2010, 459 (1–2): 39-47.
Article
PubMed
CAS
Google Scholar
An FM, Hsiao SR, Chan MT: Sequencing-based approaches reveal low ambient temperature-responsive and tissue-specific microRNAs in phalaenopsis orchid. PLoS One. 2011, 6 (5): e18937. 10.1371/journal.pone.0018937.
Article
PubMed
CAS
PubMed Central
Google Scholar
Bari R, Datt Pant B, Stitt M, Scheible WR: PHO2, microRNA399, and PHR1 define a phosphate-signaling pathway in plants. Plant Physiol. 2006, 141 (3): 988-999. 10.1104/pp.106.079707.
Article
PubMed
CAS
PubMed Central
Google Scholar
Chiou TJ, Aung K, Lin SI, Wu CC, Chiang SF, Su CL: Regulation of phosphate homeostasis by MicroRNA in Arabidopsis. Plant Cell. 2006, 18 (2): 412-421. 10.1105/tpc.105.038943.
Article
PubMed
CAS
PubMed Central
Google Scholar
Fujii H, Chiou TJ, Lin SI, Aung K, Zhu JK: A miRNA involved in phosphate-starvation response in Arabidopsis. Curr Biol. 2005, 15 (22): 2038-2043. 10.1016/j.cub.2005.10.016.
Article
PubMed
CAS
Google Scholar
Zhou ZS, Huang SQ, Yang ZM: Bioinformatic identification and expression analysis of new microRNAs from Medicago truncatula. Biochem Biophys Res Commun. 2008, 374 (3): 538-542. 10.1016/j.bbrc.2008.07.083.
Article
PubMed
CAS
Google Scholar
Huang SQ, Peng J, Qiu CX, Yang ZM: Heavy metal-regulated new microRNAs from rice. J Inorg Biochem. 2009, 103 (2): 282-287. 10.1016/j.jinorgbio.2008.10.019.
Article
PubMed
CAS
Google Scholar
Xie FL, Huang SQ, Guo K, Xiang AL, Zhu YY, Nie L, Yang ZM: Computational identification of novel microRNAs and targets in Brassica napus. FEBS Lett. 2007, 581 (7): 1464-1474. 10.1016/j.febslet.2007.02.074.
Article
PubMed
CAS
Google Scholar
Ding YF, Zhu C: The role of microRNAs in copper and cadmium homeostasis. Biochem Biophys Res Commun. 2009, 386 (1): 6-10. 10.1016/j.bbrc.2009.05.137.
Article
PubMed
CAS
Google Scholar
Voinnet O: Origin, biogenesis, and activity of plant microRNAs. Cell. 2009, 136 (4): 669-687. 10.1016/j.cell.2009.01.046.
Article
PubMed
CAS
Google Scholar
Wheeler DL, Barrett T, Benson DA, Bryant SH, Canese K, Chetvernin V, Church DM, DiCuccio M, Edgar R, Federhen S: Database resources of the national center for biotechnology information. Nucleic Acids Res. 2007, 35 (Database issue): D5-D12.
Article
PubMed
CAS
PubMed Central
Google Scholar
Burnham JF: Scopus database: a review. Biomed Digit Libr. 2006, 3: 1. 10.1186/1742-5581-3-1.
Article
PubMed
PubMed Central
Google Scholar
Henderson J: Google scholar: a source for clinicians?. CMAJ. 2005, 172 (12): 1549-1550.
Article
PubMed
PubMed Central
Google Scholar
Fitzpatrick RB: Decision support with ovid. Med Ref Serv Q. 2001, 20 (4): 47-53. 10.1300/J115v20n04_04.
Article
PubMed
CAS
Google Scholar
Kozomara A, Griffiths-Jones S: miRBase: integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res. 2011, 39 (Database issue): D152-D157.
Article
PubMed
CAS
PubMed Central
Google Scholar
Magrane M, Consortium U: UniProt knowledgebase: a hub of integrated protein data. Database (Oxford). 2011, 2011: bar009. 10.1093/database/bar009.
Article
Google Scholar
Zhou L, Liu Y, Liu Z, Kong D, Duan M, Luo L: Genome-wide identification and analysis of drought-responsive microRNAs in Oryza sativa. J Exp Bot. 2010, 61 (15): 4157-4168. 10.1093/jxb/erq237.
Article
PubMed
CAS
Google Scholar
Griffiths-Jones S: miRBase: microRNA sequences and annotation. Curr Protoc Bioinformatics. 2010, Chapter 12: Unit 12 19 11–10.
Google Scholar
Kawashima CG, Matthewman CA, Huang S, Lee BR, Yoshimoto N, Koprivova A, Rubio-Somoza I, Todesco M, Rathjen T, Saito K: Interplay of SLIM1 and miR395 in the regulation of sulfate assimilation in Arabidopsis. Plant J. 2011, 66 (5): 863-876. 10.1111/j.1365-313X.2011.04547.x.
Article
PubMed
CAS
Google Scholar
Ding Y, Chen Z, Zhu C: Microarray-based analysis of cadmium-responsive microRNAs in rice (Oryza sativa). J Exp Bot. 2011, 62 (10): 3563-3573. 10.1093/jxb/err046.
Article
PubMed
CAS
PubMed Central
Google Scholar
Wang T, Chen L, Zhao M, Tian Q, Zhang WH: Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing. BMC Genomics. 2011, 12: 367. 10.1186/1471-2164-12-367.
Article
PubMed
CAS
PubMed Central
Google Scholar
Zhu C, Ding Y, Liu H: MiR398 and plant stress responses. Physiol Plant. 2011, 143 (1): 1-9. 10.1111/j.1399-3054.2011.01477.x.
Article
PubMed
CAS
Google Scholar
Liu Z, Kumari S, Zhang L, Zheng Y, Ware D: Characterization of miRNAs in response to short-term waterlogging in three inbred lines of Zea mays. PLoS One. 2012, 7 (6): e39786. 10.1371/journal.pone.0039786.
Article
PubMed
CAS
PubMed Central
Google Scholar
Wan P, Wu J, Zhou Y, Xiao J, Feng J, Zhao W, Xiang S, Jiang G, Chen JY: Computational analysis of drought stress-associated miRNAs and miRNA co-regulation network in Physcomitrella patens. Genomics Proteomics Bioinformatics. 2011, 9 (1–2): 37-44.
Article
PubMed
CAS
Google Scholar
Golldack D, Luking I, Yang O: Plant tolerance to drought and salinity: stress regulating transcription factors and their functional significance in the cellular transcriptional network. Plant Cell Rep. 2011, 30 (8): 1383-1391. 10.1007/s00299-011-1068-0.
Article
PubMed
CAS
Google Scholar