Regulation of Arabidopsis defense responses against Spodoptera littoralisby CPK-mediated calcium signaling
BMC Plant Biology volume 10, Article number: 97 (2010)
Plant Ca2+ signals are involved in a wide array of intracellular signaling pathways after pest invasion. Ca2+-binding sensory proteins such as Ca2+-dependent protein kinases (CPKs) have been predicted to mediate the signaling following Ca2+ influx after insect herbivory. However, until now this prediction was not testable.
To investigate the roles CPKs play in a herbivore response-signaling pathway, we screened the characteristics of Arabidopsis CPK mutants damaged by a feeding generalist herbivore, Spodoptera littoralis. Following insect attack, the cpk3 and cpk13 mutants showed lower transcript levels of plant defensin gene PDF1.2 compared to wild-type plants. The CPK cascade was not directly linked to the herbivory-induced signaling pathways that were mediated by defense-related phytohormones such as jasmonic acid and ethylene. CPK3 was also suggested to be involved in a negative feedback regulation of the cytosolic Ca2+ levels after herbivory and wounding damage. In vitro kinase assays of CPK3 protein with a suite of substrates demonstrated that the protein phosphorylates transcription factors (including ERF1, HsfB2a and CZF1/ZFAR1) in the presence of Ca2+. CPK13 strongly phosphorylated only HsfB2a, irrespective of the presence of Ca2+. Furthermore, in vivo agroinfiltration assays showed that CPK3-or CPK13-derived phosphorylation of a heat shock factor (HsfB2a) promotes PDF1.2 transcriptional activation in the defense response.
These results reveal the involvement of two Arabidopsis CPKs (CPK3 and CPK13) in the herbivory-induced signaling network via HsfB2a-mediated regulation of the defense-related transcriptional machinery. This cascade is not involved in the phytohormone-related signaling pathways, but rather directly impacts transcription factors for defense responses.
One of the significant factors determining successful plant growth and reproduction is an efficient defense against insect attacks. After herbivore feeding there is a dramatic Ca2+ influx limited to a few cell layers lining the damage zone [1, 2]. Signals induced rapidly by herbivore attack have been found to spread over the leaf, leading to a strong Ca2+-dependent transmembrane potential (Vm) depolarization in the damage zone followed by a transient Vm hyperpolarization in the close vicinity and a constant depolarization at distances greater than 6-7 mm . These initial cues are transmitted within the plant by signal transduction pathways that include phosphorylation cascades, such as mitogen-activated protein (MAP) kinases, and the jasmonic acid (JA) pathway, which play a central and conserved role in promoting resistance to a broad spectrum of insects . However, there is a missing link to downstream signaling and gene regulation for defense responses. In this network, Ca2+-binding sensory proteins are of particular interest, since following Ca2+ influx the sensory proteins may secondarily decode information contained in the temporal and spatial patterns of the signal trafficking to control metabolism and gene expression .
Plants possess several classes of Ca2+-binding sensory proteins, including calmodulins, calmodulin-like proteins, calcineurin B-like proteins, and Ca2+-dependent protein kinases (CPKs) . The CPKs are of special interest, since they represent a novel class of Ca2+ sensors, having both a protein kinase domain and a calmodulin-like domain (including an EF-hand calcium-binding site) in a single polypeptide [5, 6]. CPKs constitute a large family of serine/threonine protein kinases that are broadly distributed in the plant kingdom. For example, the Arabidopsis genome is predicted to have 34 different CPKs . Arabidopsis CPK1 was the first CPK to be characterized, and is known to be activated by phospholipids and 14-3-3 proteins, which are small, highly conserved eukaryotic proteins that regulate multiple cellular enzymes, including protein kinases . AtCPKs 3, 4, 6, 11 and 32 act as abscisic acid (ABA) signaling components, and are involved in ABA-responsive gene expression, seed germination, seedling growth, and stomatal movement [9–11]. Especially, AtCPKs 4, 11 and 32 are likely to interact with ABA-related leucine zipper class transcription factors [10, 11], indicating the proximate involvement of CPKs in transcriptional regulation.
Curiously, little attention has been given to the role of CPKs in defense responses. Only one case has been reported: in tobacco, NtCDPK2 modulates the activation of stress-induced MAP kinases, and this interaction requires the synthesis and perception of wound hormones . The role of CPKs involved in the defense response against insect herbivory has never been reported. In this report, we show the involvement of two Arabidopsis CPKs (CPK3 and CPK13) in the herbivory-induced signaling network via post-translational regulation of the defense-related transcriptional machinery. Implications for possible signal trafficking via CPKs are discussed.
cpk3 and cpk13 mutants showed decreased transcript levels of defense genes in S. littoralis-damaged leaves
We obtained 19 T-DNA insertion mutant lines that were putative AtCPK-deficient mutants from the European Arabidopsis Stock Centre. Homozygous T-DNA insertion lines corresponding to each CPK gene were confirmed using the PCR method (data not shown) and challenged with herbivore damage. Transcript levels of plant defensin gene PDF1.2, which is induced in wild-type (WT) leaves exposed to Spodoptera littoralis larvae for 24 h, were investigated in the mutant leaves (Figure 1). Compared to S. littoralis-damaged WT leaves, T-DNA insertion line cpk3 (Salk_022862) and two different cpk13 lines (cpk13-1 (Salk_057893) and cpk13-2 (Salk_135795)) showed significantly lower transcript levels in S. littoralis-damaged leaves. The molecular analysis of CPK T-DNA insertion mutants and gene expression profiling of the mutants are shown in Additional file 1. In addition to our study of PDF1.2, the time-courses of the transcript levels of two other defense-related genes (Thi2.1 and VSP2) after herbivore attack were examined in cpk3, cpk13-1, and cpk13-2 leaves and compared to those in WT leaves (Figure 2). The transcript level of Thi2.1 in WT leaves was increased about 22 fold after 6 h but declined after 24 h. The cpk3 mutant showed a comparable level of the Thi2.1 expression during the time course, whereas the transcript levels in cpk13-1 and cpk13-2 leaves remained unchanged at 6 h, but increased after 24 h. Thus, WT and cpk13 probably have different temporal regulation. Throughout the time-course, the induced transcript levels of VSP2 were comparable between the WT and all the mutants (Figure 2).
Possible involvement of phytohormone signaling in the herbivory-related CPK cascades
To assess whether loss of CPK function affects the signal transduction involved in the defense response, we explored the biosynthesis of JA, jasmonyl-L-isoleucine (JA-Ile, an active form of JA ), ethylene, and abscisic acid (ABA, known to be involved in protective wound-healing processes ). As shown in Figure 3, all the phytohormones examined in this study were formed and accumulated at a similar rate in the infested WT, compared to the cpk mutant leaves (Figure 3), indicating that CPK3 and CPK13 are not upstream signal kinases for the biosynthesis of JA, ABA and ethylene. We also investigated the PDF1.2 expression levels in WT and in cpk3 and cpk13 mutants by applying an exogenous solution of either JA, ethephon (a chemical which releases ethylene), or ABA (Figure 4). Compared to the control, after 6 h the transcript levels of PDF1.2 were very slightly induced by JA or ABA to levels comparable to those in WT and mutant leaves. Ethephon treatment resulted in drastic but comparable increases of the transcript in both WT and mutant leaves. We therefore conclude that the CPK3 and CPK13 cascades are not closely linked to the above phytohormone signaling and biosynthesis cascades.
Increased intracellular Ca2+ levels in cpk3leaf cells after herbivore and mechanical damage
It is interesting to note that the cpk3 mutant showed abnormal changes of the cytosolic Ca2+ level after insect damage. As shown in Figure 5, when the membrane-permeable Fluo-3 AM [Ca2+-sensitive fluorescent probe] was applied to WT leaf tissues, it showed a cytoplasmic subcellular localization at sites damaged by S. littoralis (Figure 5A) or after mechanical wounding (Figure 5B). cpk3 but not cpk13-1 plants showed a more marked increase of the cytosolic Ca2+ level after the damage, compared to WT.
Substrate targeting of CPK3 and CPK13
In previous studies, CPK3 was found to be localized in the nucleus and the cytosol . In this study, we additionally tested the subcellular localization of CPK13-GFP fusion proteins in transiently expressing onion peels, which revealed nuclear, cytosolic and plasma membrane localizations of the fusion proteins (Figure 6). Accordingly, in order to screen the protein target of CPK3 and CPK13, protein kinase assays with 100 nuclear and cytosolic protein substrates synthesized using the wheat germ cell-free system (see Additional file 2) were carried out. CPK3 or CPK13 proteins purified from a cell-free extract were incubated with radiolabeled ATP, CaCl2 and the 100 distinct substrates. Both CPK3 and CPK13 showed auto-phosphorylation in the presence of radiolabeled ATP and CaCl2 (Figure 7A). Notably, CPK3 was auto-phosphorylated along with increased concentration of Ca2+, whereas CPK13 was not, indicating that CPK3 was strictly Ca2+-dependent. Auto-phosphorylation of CPK stringently reflects the intensity of the phosphorylation of substrate targets . As shown in Figure 7B and Additional file 3, CPK3 phosphorylated three transcription factors (TFs) [JA/ethylene-inducible APE/ERF domain transcription factor 1 (ERF1) , heat shock factor HsfB2a (Hsf22), and the wound-inducible CZF1/ZFAR1 transcription factor ]. ATL2, a member of a multigene family of highly related RING-H2 zinc finger proteins that function as E3 ubiquitin ligases [19, 20] and a potent regulator of PDF1.2 transcription , was also phosphorylated by CPK3 (discussed in Additional file 4). Addition of BAPTA, a calcium chelator, to the reaction mixture abolished the phosphorylation by CPK3, suggesting that these phosphorylations were strictly Ca2+-dependent. This result was in line with the Ca2+-dependent auto-phosphorylation of CPK3, described above. In contrast, the CPK13-derived protein labeling (auto-phosphorylation) was scarcely activated by the addition of Ca2+ ion (Figure 7A), suggesting that CPK13 has very high sensitivity for autophosphorylation, like soybean CDPKα . CPK13 strongly phosphorylated HsfB2a, irrespective of the presence of BAPTA.
HsfB2a takes part in the regulation of the herbivore-induced transcription of PDF1.2
We investigated the PDF1.2 expression levels in S. littoralis-damaged leaves of Arabidopsis WT and HsfB2a T-DNA insertion mutants (Salk_027578) (Figure 8A). Compared to S. littoralis-damaged WT leaves, hsfB2a plants showed significantly lower transcript levels in S. littoralis-damaged leaves. Thus, HsfB2a appeared to be a positive regulator of herbivore-induced PDF1.2 expression. In addition, to investigate the in vivo function of CPKs, a constitutively active form of CPK and HsfB2a were co-expressed as cofactors for the transient expression of a reporter (GUS) gene under the control of the PDF1.2 promoter in Nicotiana benthamiana leaves, in Agrobacterium tumefaciens-mediated transient expression (agroinfiltration) assays. For these assays, we prepared a constitutively active form of CPK proteins which lacks junction and calmodulin-like domains and thus no longer shows Ca2+ dependency. As shown in Figure 8B, the reporter gene activity was drastically increased when co-expressed with HsfB2a as effector. The activation by HsfB2a was further enhanced (6.6- and 1.9-fold) when CPK3 and CPK13 were co-expressed, respectively. However, when CPK3 or CPK13 was co-expressed in the absence of HsfB2a, scarcely any increase of the expression of the reporter gene was observed. Similarly, other CPK substrate transcription factors (ERF1 or CZF1/ZFAR1) were co-expressed as effectors, but neither of them resulted in significant transactivation of the GUS marker gene (data not shown).
Regulation of Ca2+ homeostasis is important, particularly when Ca2+ is involved as a signaling ion. In plant cells, Ca2+-binding proteins also serve as regulators of internal free Ca2+ levels. Protein phosphorylation is the most common type of post-translational modification, and functions through phosphorylation-induced conformational changes . Since CPKs may be involved in the specificity and cross-talk of signal transduction for a variety of biotic and abiotic stresses, their possible involvement in active signaling cascades in herbivore responses needs to be investigated . The present study provides a new view of a signaling network for plant-insect interactions. This cascade is not involved in the phytohormone (JA, ethylene and ABA)-related signaling pathways, but rather is able to directly impact transcription factors for defense responses. In fact, we did not observe striking effects of loss of CPK function on the biomass of S. littoralis larvae by feeding cpk3 or cpk13 mutants compared to WT plants for up to 3 days (Additional file 5). This suggests that more genes than just PDF1.2 contribute in a complex manner to the onset of acquired resistance to the generalist herbivore S. littoralis. For instance, compared to the levels in WT leaves infested by S. littoralis, the leaf transcript levels of Thi2.1 were higher in cpk13 after 24 h but lower after 6 h (Figure 2).
Herbivory responses in Arabidopsis may not be mediated strikingly by the ABA signaling network (Figures 3 and 4). In guard cells, CPK3 appears to act in the phosphorylation of plasma membrane S-type anion channels for the Ca2+-reactive stomatal closure response . Our data show that a loss of CPK3 function may consequently lead to an increase of cytosolic Ca2+ concentration in the infested leaf cells (Figure 5). If we consider that ABA activation of plasma membrane Ca2+-permeable channels is, in contrast, impaired in cpk3 or double cpk3cpk6 mutant guard cells , we can argue that mesophyll cells, which are the most responsive to herbivore attack, respond in a different way compared to guard cells. In summary, the present findings are consistent with a model in which additional signaling branches function in the herbivory signal transduction network in parallel to CPK3-imposed feedback regulation of Ca2+ channels, and these additional branches are different from those of the stomatal closure response controlled via ABA signaling. In contrast to CPK3, CPK13 does not act upstream of herbivore-stimulated Ca2+ transients (Figure 5).
Screening of the databases for cis-acting regulatory DNA elements revealed the presence of a GCC box ((A)GCCGCC ) in the PDF1.2 promoter that is potentially recognized by ERF1, which is one of the CPK3 substrates (Figure 7) and a potent regulator of PDF1.2 . However, our agroinfiltration assays showed that ERF1 as a cofactor failed to transactivate the reporter GUS gene under the control of the GCC consensus sequence (fused to a minimum TATA box) and the PDF1.2 promoter in N. benthamiana (data not shown). We therefore infer that ERF1 may interact only indirectly with the PDF1.2 promoter, similarly to MYC2 . Otherwise, additional cis/trans-factors or protein modifications might be required to fully facilitate this hetero planta system.
According to our agroinfiltration assays, CPK3-or CPK13-derived phosphorylation(s) of a heat shock factor (HsfB2a) appeared to be directly and positively involved in PDF1.2 transcriptional regulation (Figure 8B). Heat shock factors (Hsfs) are well known to function in the regulation of stress-inducible genes (e.g., Hsp) by recognizing a conserved binding motif (heat shock element [HSE]: three inverted repeats of nGAAn units [28, 29]). However, the PDF1.2 promoter lacks intact HSE motifs. It is therefore considered that HsfB2a can act as part of the transcriptional machinery of PDF1.2 transcription by directly binding to non-HSE sequence(s) present in the promoter, and then CPK3 and CPK13 phosphorylate HsfB2a to modulate its activity. Similarly, Kumar et al.  reported that double knockout hsfb1/hsfb2b plants showed up-regulation of the basal mRNA-levels of PDF1.2 in mutant plants. Therefore, it will be of great interest to identify a novel non-HSE DNA recognition site for the class B-Hsf transcription factors.
HsfB2a belongs to the Hsf class B transcription factors (B-Hsfs). However, the function of class B-Hsfs differs from that of class A-Hsfs due to a structural variation within the oligomerization domain and the lack of an AHA-motif, which is required for the transcriptional activation function of class A-Hsfs . Since B-Hsfs have the capacity to bind to similar or the same HSE sites in the heat shock gene promoters as class A-Hsfs, most of them may act as repressors of target gene expression [32, 33]. If class B-Hsfs generally antagonistically interact with A-Hsfs by binding (or competing for binding) to the HSE consensus sequence, their regulatory mechanisms would in most cases be different from the positive regulation of the herbivore-induced PDF1.2 promoter lacking intact HSE motifs. A-Hsfs should be investigated as possible additional cofactors in further studies.
These results reveal the involvement of two Arabidopsis CPKs (CPK3 and CPK13) in the herbivory-induced signaling network via HsfB2a-mediated regulation of the defense-related transcriptional machinery. To reveal whether protein phosphorylation has significant effects on the transcript levels in response to feeding by caterpillars, future studies such as genetic analyses investigating double mutants defective for both CPKs and substrates or plants overexpressing those genes will be needed.
Plants, caterpillars, and treatments
Arabidopsis plants (Col-0) were grown in soil. Individual plants were grown in plastic pots in a growth chamber at 22°C (160 μE m-2 s-1 during a 12-h photoperiod) for 5 weeks. Larvae of S. littoralis Boisd. (Lepidoptera, Noctuidae) were reared on artificial diet  in a plastic box (25 ± 1°C; 14 h light: 10 h dark). For the herbivory treatments, three second-and third-instar larvae were placed on leaves of an Arabidopsis plant (non bolting). For chemical treatment, (+)-jasmonic acid or abscisic acid (Sigma-Aldrich) at a concentration of 0.3 mM or 50 μM, respectively, in aqueous solution, or ethephon (0.3 mM, Sigma-Aldrich) at a concentration of 3 mM in sodium phosphate buffer (50 mM, pH7), was evenly sprayed (about 3 ml) onto intact plants.
The homozygous T-DNA lines were screened using two PCR tests http://signal.salk.edu/tdnaprimers.html using either a pair of primers consisting of a T-DNA left border primer (LBa1) and a specific primer for the corresponding T-DNA insertion region or a pair of gene-specific primers which straddle the outer T-DNA flanking regions. Genomic DNAs were isolated from the leaves following the CTAB method , and were used as the template for polymerase chain reaction (PCR) following the method described in: http://signal.salk.edu/tdnaprimers.2.html. These PCR analyses were performed at least twice through the two generations along T3 or T4 to confirm whether the lines are certainly homozygous.
Reverse transcription (RT)-PCR and real-time PCR
Total RNA was isolated from leaf tissues using a Qiagen RNeasy Plant RNA kit and an RNase-Free DNase Set (Qiagen) following the manufacturer's protocol. First-strand cDNA was synthesized using SuperScript II RT, oligo(dT)12-18 primer, and 1 μg of total RNA at 42°C for 50 min. The real-time PCR was done on an M×3000 P Real-Time PCR System (Stratagene) . PCR conditions were chosen by comparing threshold values in a dilution series of the RT product, followed by non-RT template control and non-template control for each primer pair. Relative RNA levels were calibrated and normalized with the level of ACT1 (At2G37620) mRNA.
Quantification of JA, JA-Ile, ABA and ethylene
Leaves (200 mg) were harvested in FastPrep tubes containing 0.9 g of FastPrep matrix (BIO 101, Vista, CA), flash-frozen in liquid nitrogen, and stored at -80°C until use. Ethyl acetate (1 ml), spiked with 200 ng each of internal standards2H2-JA, 13C6-JA-Ile and 2H6-ABA, was added to each sample and then the mixture was homogenized using a FastPrep homogenizer (Savant Instruments, Holbrook, NY). After centrifugation at 12,000 g for 20 min at 4°C, supernatants were transferred to Eppendorf tubes. Each pellet was re-extracted with 1 ml of ethyl acetate and centrifuged; supernatants were combined and then evaporated to dryness under vacuum. The residue was resuspended in 0.5 ml of 70% methanol/water (v/v) and centrifuged to clarify phases, and the supernatants were analyzed using a 1200 L LC/MS system (Varian, Palo Alto, CA) as described in .
Ethylene production was measured in real-time with a photoacoustic laser spectrometer (ETH-PAC1-TR, http://www.invivo-gmbh.de, Germany) in combination with a gas multiplexer (4 channels) , in which an Arabidopsis plant in a pot was infested with larvae for up to 24 h.
Intracellular calcium concentration measurement
A solution of Fluo-3 AM (acetoxy-methyl ester of Fluo-3, 5 μM, Fluka, Buchs, Switzerland), 0.5 mM calcium sulphate, and 2.5 μM DCMU [3-(3',4'-dichlorphenyl)-1,1-dimethylurea] in 50 mM MES buffer, pH 6.0, was used for initial treatment of leaves of an intact Arabidopsis plant as previously described . A leaf was cut once with a razor blade in order to allow the dye to enter the tissues. One hour after treatment with Fluo-3 AM, the leaf was fixed on an Olympus FLUOview confocal laser scanning microscope (CLSM) stage without detaching it from the plant. The microscope was operated with a krypton/argon laser at 488 nm and 568 nm wavelengths: the first wavelength excited the Fluo-3 dye emitting green light, while the second excited mostly chloroplasts emitting red fluorescence. Images generated using FluoView software were analyzed with NIH Image J software. Earlier microscopic analysis showed the false-color subcellular localization of the dyes, which indicated that the dyes are loaded mainly into the cytosol .
Vector construction and transient expression of GFP fusion proteins
Gateway Technology (Invitrogen) was used for the generation of p2GWF7 transformation constructs, which consisted of a target gene (CPK13 ORF cDNA) bearing an N-terminal fusion to eGFP under the control of the dual Cauliflower Mosaic Virus 35S promoter for plant transformations . The attB adaptor-bearing PCR primers (see Additional file 6) were designed for the generation of attB PCR products for recombination with the donor vector pDONRzeo via BP Clonase reactions (Invitrogen). Fully sequenced entry clones were recombined in LR Clonase reactions with the p2GWF7 vector . One microgram of the plasmid was precipitated onto 1.0-μm spherical gold particles (Bio-Rad). Onion peels were bombarded using a particle gun PDS-1000/He (Bio-Rad) according to the manufacturer's instructions. After 24 h, GFP fluorescence of the onion peel was observed under a BX51 fluorescent microscope (OLYMPUS).
Transcription and cell-free protein synthesis
In order to prepare recombinant proteins fused with GST or a biotin ligase recognition site at their N-terminus, Riken Arabidopsis full-length cDNA clones (RAFL) were used. The DNA constructs were made, according to , by two rounds of "Split-Primer" PCR, with the first PCR performed with a target protein-specific primer (5'-CCACCCACCACCACCAatgnnnnnnnnnnnnnnnn-3'; lowercase indicates the 5'-coding region of the target gene) and the AODA2306 primer. The second PCR was performed with an SPu primer, AODA2303 primer, and a deSP6E02bls-S1 primer, which contains a biotin ligase recognition site sequence (for the CPK substrates). For the CPK-GST fusion proteins, a full-length ORF was reinserted into pEU-E01-GST-TEV-MCS vector (Cell-free Sciences, Yokohama, Japan) and used for in vitro transcription. In vitro transcription, cell-free protein synthesis, and protein purification were performed as described [42, 43].
Auto-phosphorylation reaction of recombinant CPK
Crude GST-tagged recombinant CPK protein (20-40 μg) produced by the dialysis method  was precipitated with glutathione Sepharose™ 4B (GE Healthcare). The protein on the Sepharose was washed twice with PBS buffer and then treated with PBS buffer containing 2.5 mM 1,2-bis-(2-aminophenoxy)ethane-N,N,N',N'-tetra acetic acid (BAPTA, Sigma-Aldrich) at 4°C for 10 min, to remove free Ca2. After washing with PBS buffer, the recombinant CPK was eluted with 45 μl of PBS buffer containing 0.1 U of AcTEV protease (Invitrogen), which cleaved the CPK from the GST-tag. Autophosphorylation reactions were carried out in 10 μl of total reaction mixture containing 50 mM Tris-HCl (pH 7.5), 1 μl of partially purified CPK, 0 to 500 μM CaCl2, 10 mM potassium acetate, 50 mM MgCl2, 0.5 mM DTT and 37 kBq of [γ-32P] ATP at 30°C for 30 min. To stop the reaction, 5 μl of 3x-sample buffer [150 mM Tris-HCl (pH 6.8), 6% SDS, 3% 2-mercaptoethanol, and 0.012% bromophenol blue] was added to the reaction mixture. After boiling the reaction mixture, recombinant CPK was separated by 12.5% SDS-polyacrylamide gel electrophoresis (PAGE). The labeled signals were detected with BAS-2500 (FUJIFILM, Japan).
In vitrophosphorylation of target protein
In vitro phosphorylation of target was carried out according to a previously described method with a minor modification , using partially purified recombinant CPK and substrate. Partially purified GST-tagged recombinant CPK was prepared as described above, but excluding BAPTA from the PBS buffer. Forty microliters of each crude biotinylated substrate protein produced by the bilayer method  were attached to Streptavidin Magnesphere Paramagnetics particles (Promega). After washing, the substrate protein on the particles (1-2 μg) was incubated in 15 μl of reaction mixture containing 50 mM Tris-HCl (pH 7.5), 1 μl of purified CPK, 100 μM CaCl2, 500 mM potassium acetate, 50 mM MgCl2, 0.5 mM DTT and 37 kBq of [γ-32P] ATP, in the presence or absence of 500 μM BAPTA at 30°C for 30 min. Following the reaction, the beads were washed twice with PBS, then boiled in sample buffer [50 mM Tris-HCl (pH 6.8), 2% SDS, 1% 2-mercaptoethanol, and 0.004% bromophenol blue]. For the detection method, see above.
Agrobacterium tumefaciens-mediated transient expression (agroinfiltration) in Nicotiana benthamiana
A cDNA fragment of a truncated variant lacking junction and calmodulin-like domains was cloned into the pER8 (XVE) binary vector . The full-length coding region of HsfB2a was inserted into the GUS reporter gene site of the binary vector pGreen 0229 (35S promoter::GUS including intron) . The 1-kb PDF1.2 promoter region upstream of the transcription start site was inserted into the 35S promoter region of the above pGreen-GUS vector.
Agroinfiltration was carried out according to a modified protocol from Kobayashi et al. (2007) . Binary plasmids were transformed into Agrobacterium strain GV3101, which contains the transformation helper plasmid pSoup , and the bacteria were cultured overnight. The culture was diluted 10-fold in Luria-Bertani medium/rifampicin with kanamycin or spectinomycin, and then was cultured until OD600 0.6. Cells were harvested by centrifugation and resuspended in 10 mM MES-NaOH, pH 5.6 and 10 mM MgCl2. The bacterial suspensions were adjusted to OD600 0.5, and then acetosyringone was added to a final concentration of 150 μM. The suspensions were incubated for 2-4 h at 22°C, and a mixture of those carrying CPK, HsfB2a, luciferase (LUC, see below) and PDF1.2 promoter::GUS vectors at an approximate ratio (1:1:1:3) was infiltrated into leaves of 4- to 5-week-old N. benthamiana plants by using a needleless syringe. One day after bacterial infiltration, β-estradiol (10 μM) was infiltrated into the same position of the leaf to induce the expression of a chimeric transcription activator XVE gene , and the plant was kept for 1 day. We then prepared an enzyme extract by homogenization of a leaf with a grinding buffer containing 100 mM potassium phosphate (pH 7.8), 1 mM EDTA, 7 mM 2-mercaptoethanol, 1% Triton X-100 and 10% glycerol, followed by centrifugation. GUS activity was measured by monitoring cleavage of the β-glucuronidase substrate 4-methylumbelliferyl β-D-glucuronide (MUG) . Agrobacterium carrying pGreen 0229 (35S promoter::LUC including intron) was used to normalize for the efficiency of agroinfiltration. The luciferase activity in protein extracts was measured using a PicaGene luciferase kit (Toyo Ink, Japan) according to the manufacturer's protocol.
Data and statistical analysis
At least five repetitions with individual biological sample sets were used for the statistical treatment of the data. The data are expressed as mean values; error bars indicate the standard error. To evaluate the significance of differences of data, ANOVA followed by Fisher's PLSD test was performed.
Data and statistical analysis
At least five repetitions with individual biological sample sets were used for the statistical treatment of the data. The data are expressed as mean values; error bars indicate the standard error. To evaluate the significance of differences of data, ANOVA followed by Fisher's PLSD test was performed.
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We gratefully acknowledge Dr. Kazuo Shinozaki and Dr. Motoaki Seki for the cDNA library, Dr. Koichi Ueda for GFP analysis, and Dr. Cbgowda Rayapuram, Ms. Eva Rothe, Dr. Ian T. Baldwin and Dr. Ralph Gäbler for phytohormone analysis. This work was financially supported in part by Global COE Program A06 of Kyoto University; a Grant-in-Aid for Scientific Research from the Ministry of Education, Culture, Sports, Science, and Technology of Japan (No. 21770042) to GA; and the Doctorate School of Science and High Technology of the University of Turin (to MEM).
CNK carried out all the biological and genetic analyses. HT and AM carried out cell-free protein synthesis and in vitro phosphorylation assays and participated in writing the methods section. SQ, CB and SAZ performed the RT-PCR and real-time PCR experiments. MEM and SB carried out calcium measurement. NI and HY helped with agroinfiltration assays and participated in writing the methods section. WB, JT and YE participated in the coordination of the work. TS and GA conceived the intellectual design of the project and wrote the manuscript. All authors read and approved the final manuscript.
Chidananda Nagamangala Kanchiswamy, Hirotaka Takahashi contributed equally to this work.
Electronic supplementary material
Additional file 1: Molecular analysis of CPK T-DNA insertion mutants and gene expression profiling in the mutants. A, Disruption of CPK mRNA expression in leaves of the respective cpk mutants and the Col-0 wild-type (WT). None of the mutant CPK genes was expressed in the corresponding mutant leaves under the growth conditions, whereas all of them were expressed in WT leaves. B, T-DNA insertion site in cpk3 (Salk_022862), cpk13-1 (Salk_057893) and cpk13-2 (Salk_135795). PCR was performed with a primer pair consisting of a left border primer of the T-DNA and a gene-specific primer, and PCR products were sequenced to determine the T-DNA insertion positions (solid lines). ATG and TGA/TAG indicate start and stop codons. White boxes indicate exons. The T-DNA inserts in cpk3 and cpk13-1 are located in the first exon, while the insertion in cpk13-2 is located in the promoter region upstream of the CPK13 gene. Note that Southern blot analyses of homozygous plants showed only a single T-DNA insertion in all four mutants (data not shown). (PPT 174 KB)
Additional file 2: Substrate targeting for CPKs. A table listing protein substrates synthesized using the wheat germ cell-free system. (DOC 81 KB)
Additional file 3: Substrate targeting of CPK3 and CPK13. The quantitative values for data in Figure 7B are shown. (PPT 194 KB)
Additional file 4: Supplemental discussion. Implications for possible involvement of ubiquitination in the CPK signaling pathway are discussed. (DOC 86 KB)
Additional file 5: Growth of S. littoralis larvae on a WT, cpk3 and cpk13-1 plant. Freshly hatched S. littoralis larvae were grown on artificial diet. The second instar of the larva was subjected to growth on a WT, cpk3 and cpk13-1 plant in a pot at 25°C. The larva was allowed to feed for up to 3 days, and its biomass was recorded every 24 h. (PPT 153 KB)
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Kanchiswamy, C.N., Takahashi, H., Quadro, S. et al. Regulation of Arabidopsis defense responses against Spodoptera littoralisby CPK-mediated calcium signaling. BMC Plant Biol 10, 97 (2010). https://doi.org/10.1186/1471-2229-10-97