Identification of QTNs, QTN-by-environment interactions, and their candidate genes for salt tolerance related traits in soybean

Table 2 Two known and three candidate genes around QEIs for salt tolerance index traits in soybean

Trait	Marker	Chr	Pos (bp)	LOD	r²(%)	P-value	Sign	Gene	Homologous gene in Arabidopsis			Reference
Trait	Marker	Chr	Pos (bp)	LOD	r²(%)	P-value	Sign	Gene	Gene	Symbol	Annotation	Reference
DWR	Gm11:6,095,319	11	6,095,319	79.79	15.32	2.76E-76	SIG	Glyma11g08440(GmSK1)	AT1G75950	SKP1	S phase kinase-associated protein 1	Chen et al. [54]
LR	Gm14:47,141,670	14	47,141,670	22.58	1.88	2.17E-22	SIG	Glyma14g38010(GmWRKY49)	AT2G38470	WRKY33	WRKY DNA-binding protein 33	Xu et al. [56]
DWR	snp20887	4	47,545,085	10.5766	1.7005	8.54E-09	SIG	Glyma04g41701	AT5G24110	WRKY30	WRKY DNA-binding protein 30
LH	Gm13:35,351,832	13	35,351,832	13.5898	1.9055	1.65E-13	SIG	Glyma13g33590	AT1G53580	GLY3	glyoxalase II 3
FWR	Gm16:26,218,707	16	26,218,707	26.1218	2.9313	1.42E-23	SIG	Glyma16g22630	AT4G35640	SERAT3;2	serine acetyltransferase 3;2

DWR the dry weights of roots, FWR the fresh weights of roots, LR the length of main root, LH the length of hypocotyls, Chr chromosome, Pos position, SIG significant, SUG suggestion

ISSN: 1471-2229