Fig. 6

Differentially expressed antioxidant-related genes analysis. (A) Gene ontology (GO) classification of differentially expressed reactive oxygen species (ROS) genes. The horizontal coordinate is GO classification, the left side of the vertical coordinate is the percentage of the number of genes, and the right side is the number of genes. (B) Gene ontology of ROS genes. The horizontal coordinate is the proportion of the genes we’re interested and all the differentially expressed genes, while the vertical coordinate is each GO annotation entry. The size of the dots represents the number of differentially expressed genes annotated in the pathway, and the color of the dots represents the q-value of the hypergeometric test. (C) Kyoto Encyclopedia of Genes and Genomes (KEGG) classification of differentially expressed antioxidant-related genes. The horizontal coordinate is the number of genes annotated to this pathway and its proportion to the total number of genes annotated. (D) Cluster heat maps of antioxidant-related genes 0 d and 5 d after Xcc infection. Red and blue colour indicate up-regulated and down-regulated genes, respectively. The same below