Table 2 Enrichment pathways of DE-APA genes whose expression levels were negatively correlated with APA trend in resistant rice after bacterial blight
| Â | Description | pvalue | geneID | Count |
|---|---|---|---|---|
R | Inositol phosphate metabolism | 0.063248525 | Os03g0726200/Os10g0103800 | 3 |
Phosphatidylinositol signaling system | 0.068656835 | Os03g0726200/Os10g0103800 | 3 | |
Lysine biosynthesis | 0.103093931 | Os04g0254000 | 3 | |
Arachidonic acid metabolism | 0.103093931 | Os03g0819100 | 2 | |
Linoleic acid metabolism | 0.120694688 | Os03g0179900 | 2 | |
Nucleocytoplasmic transport | 0.143164633 | Os01g0383900/Os03g0110400 | 2 | |
Ether lipid metabolism | 0.154895276 | Os02g0119800 | 2 | |
Spliceosome | 0.164039354 | Os07g0633200/Os02g0266100/Os03g0110400 | 2 | |
Folate biosynthesis | 0.187802196 | Os02g0140300 | 1 | |
RNA polymerase | 0.242418476 | Os07g0615800 | 1 | |
Biosynthesis of amino acids | 0.256379679 | Os09g0565700/Os04g0254000/Os05g0429000 | 1 | |
Terpenoid backbone biosynthesis | 0.334537802 | Os06g0167400 | 1 | |
Nucleotide excision repair | 0.347707494 | Os02g0179300 | 1 | |
Glycine, serine and threonine metabolism | 0.379533741 | Os05g0429000 | 1 | |
Ribosome | 0.428550236 | Os02g0198900/Os01g0304000/Os03g0751400 | 1 | |
Glyoxylate and dicarboxylate metabolism | 0.444332092 | Os05g0429000 | 1 | |
Proteasome | 0.444332092 | Os02g0182500 | 1 | |
Plant-pathogen interaction | 0.451293367 | Os07g0568600/Os03g0128700 | 1 | |
Glycerophospholipid metabolism | 0.507524189 | Os02g0119800 | 1 | |
Biosynthesis of nucleotide sugars | 0.512463058 | Os03g0832600 | 1 | |
Cysteine and methionine metabolism | 0.576755287 | Os02g0771600 | 1 | |
Amino sugar and nucleotide sugar metabolism | 0.706562415 | Os03g0832600 | 1 | |
MAPK signaling pathway—plant | 0.71250573 | Os03g0610900 | 1 | |
Plant hormone signal transduction | 0.873121231 | Os03g0610900 | 1 |