Table 1 Significant QTL based on G’ value
QTL | Chr. | Start | End | Interval (Kbp) | SNPs in QTL | maxGprime | posMaxGprime | meanQval |
|---|---|---|---|---|---|---|---|---|
1 | Chr01 | 41,240,276 | 44,039,080 | 2,798.80 | 43 | 25.73 | 44,039,080 | 2.19E-03 |
2 | Chr01 | 49,051,009 | 52,242,985 | 3,191.98 | 165 | 36.24 | 50,409,704 | 6.05E-04 |
3 | Chr01 | 53,348,325 | 54,535,456 | 1,187.13 | 32 | 23.63 | 54,355,596 | 7.74E-04 |
4 | Chr02 | 27,248 | 601,373 | 574.13 | 12 | 23.49 | 27,248 | 4.74E-04 |
5 | Chr02 | 2,799,264 | 3,753,269 | 954.01 | 12 | 14.01 | 3,388,507 | 4.90E-03 |
6 | Chr02 | 6,899,948 | 14,643,258 | 7743.31 | 218 | 28.26 | 11,326,683 | 6.47E-04 |
7 | Chr03 | 115,054 | 1,081,719 | 966.67 | 50 | 19.56 | 115,054 | 1.75E-03 |
8 | Chr04 | 2,936,165 | 4,080,540 | 1,144.38 | 42 | 16.87 | 3,253,769 | 1.19E-03 |
9 | Chr04 | 35,995,923 | 47,428,227 | 11,432.30 | 162 | 35.41 | 46,239,500 | 1.12E-03 |
10 | Chr05 | 3,271,448 | 4,279,942 | 1,008.49 | 53 | 17.17 | 3,965,942 | 3.28E-03 |
11* | Chr05 | 25,031,503 | 27,363,173 | 2331.67 | 51 | 26.59 | 25,031,503 | 7.81E-04 |
12 | Chr05 | 30,454,125 | 35,160,277 | 4,706.15 | 290 | 30.22 | 30,962,290 | 9.00E-04 |
13* | Chr06 | 9,379,113 | 17,419,325 | 8,040.21 | 287 | 59.91 | 13,782,174 | 2.67E-04 |
14 | Chr06 | 18,196,466 | 19,278,691 | 1,082.23 | 27 | 18.82 | 18,560,320 | 6.58E-04 |
15 | Chr06 | 43,801,167 | 48,495,601 | 4,694.43 | 332 | 17.05 | 47,217,336 | 2.50E-03 |
16 | Chr07 | 35,077 | 2,932,992 | 2,897.92 | 98 | 25.96 | 35,077 | 2.89E-04 |
17 | Chr07 | 7,073,199 | 9,665,938 | 2,592.74 | 181 | 19.62 | 8,324,676 | 1.24E-03 |
18 | Chr09 | 41,085,584 | 42,686,800 | 1,601.22 | 61 | 30.26 | 42,356,413 | 9.07E-04 |
19 | Chr10 | 1,571,885 | 2,512,965 | 941.08 | 71 | 14.10 | 2,043,359 | 6.36E-03 |
20 | Chr11 | 143,592 | 1,299,549 | 1,155.98 | 44 | 31.55 | 143,592 | 9.74E-05 |
21 | Chr11 | 2,544,367 | 5,313,076 | 2,768.71 | 67 | 25.27 | 4,444,562 | 1.61E-03 |
22 | Chr12 | 32,990 | 4,897,540 | 4,864.55 | 199 | 43.63 | 32,990 | 4.47E-04 |
23* | Chr12 | 10,308,599 | 14,920,219 | 4,611.62 | 129 | 47.50 | 12,572,720 | 6.58E-04 |
24 | Chr12 | 24,784,017 | 33,230,491 | 8,446.47 | 32 | 25.51 | 32,399,508 | 8.71E-05 |
25 | Chr13 | 12,113,411 | 14,044,703 | 1,931.29 | 36 | 16.00 | 13,660,348 | 2.06E-03 |
26* | Chr13 | 16,613,274 | 19,313,959 | 2,700.69 | 61 | 19.26 | 19,313,959 | 2.04E-03 |
27 | Chr14 | 7,742,890 | 11,149,172 | 3,406.28 | 50 | 37.87 | 10,007,807 | 9.28E-04 |
28 | Chr14 | 13,184,157 | 14,022,011 | 837.85 | 28 | 14.19 | 13,184,157 | 4.84E-03 |
29 | Chr14 | 47,501,309 | 48,768,660 | 1,267.35 | 48 | 16.79 | 47,987,676 | 2.43E-03 |
30* | Chr15 | 8,158,980 | 15,966,489 | 7,807.51 | 264 | 66.69 | 11,529,987 | 3.48E-04 |
31 | Chr15 | 28,958,496 | 33,111,213 | 4,152.72 | 10 | 18.07 | 28,958,496 | 2.34E-03 |
32 | Chr15 | 47,894,172 | 48,151,989 | 257.82 | 19 | 13.03 | 47,967,989 | 7.89E-03 |
33* | Chr16 | 29,537,679 | 37,675,335 | 8,137.66 | 359 | 91.40 | 35,913,263 | 3.79E-04 |
34 | Chr17 | 8,887,228 | 9,854,993 | 967.77 | 27 | 16.73 | 9,370,829 | 1.90E-03 |
35 | Chr17 | 13,905,963 | 13,940,094 | 34.13 | 8 | 11.56 | 13,905,963 | 9.64E-03 |
36* | Chr17 | 15,249,277 | 24,792,714 | 9,543.44 | 87 | 32.42 | 24,454,657 | 4.56E-04 |
37 | Chr17 | 26,551,382 | 33,488,594 | 6,937.21 | 119 | 29.33 | 27,919,226 | 1.04E-03 |
38 | Chr17 | 40,588,752 | 41,302,057 | 713.31 | 32 | 20.64 | 41,302,057 | 1.83E-03 |
39 | Chr18 | 156,869 | 1,536,235 | 1,379.37 | 166 | 14.59 | 156,869 | 3.88E-03 |
40 | Chr18 | 24,255,171 | 30,561,365 | 6,306.19 | 26 | 46.51 | 25,654,977 | 1.33E-04 |
41* | Chr18 | 34,518,559 | 45,178,142 | 10,659.58 | 116 | 42.77 | 35,960,162 | 7.62E-04 |
42 | Chr18 | 51,149,029 | 51,726,435 | 577.41 | 107 | 12.04 | 51,487,813 | 7.43E-03 |
43 | Chr18 | 56,423,170 | 57,991,810 | 1,568.64 | 94 | 26.46 | 57,242,470 | 1.77E-03 |
44* | Chr19 | 42,213,656 | 46,346,712 | 4,133.06 | 95 | 45.93 | 44,142,462 | 8.53E-04 |
45 | Chr19 | 47,903,184 | 48,412,831 | 509.65 | 12 | 13.34 | 48,171,387 | 6.21E-03 |
46 | Chr20 | 33,702,942 | 39,259,901 | 5,556.96 | 263 | 35.78 | 36,740,673 | 5.03E-04 |