Table 3 Showing detailed information on pathway annotations of 73 candidate loci
QTN name | Gene namea | Chromosome | Position | GO number | Annotation |
|---|---|---|---|---|---|
41184096 | LOC_Os01G71190 | 1 | 41186974..41188839 | GO:0031090 | Photosystem II reaction center PSB28 protein |
41184096 | LOC_Os01G71106 | 1 | 41160726..41155813 | Ë— | Disease resistance protein (TIR-NBS-LRR class) family |
41184096 | LOC_OS03G07960 | 3 | 4069589..4072442 | GO:0031090 | expressed protein |
41184096 | LOC_Os03G08020 | 3 | 4506887-4507439 | GO:0003746 | elongation factor Tu, putative, expressed |
10037576 | LOC_Os02G17460 | 2 | 10049191..10042478 | Ë— | tesmin/TSO1-like CXC domain containing protein, expressed |
10037576 | LOC_OS02G17520 | 2 | 10084266..10087922 | GO:0034622 | cytochrome c-type biogenesis protein ccmH precursor, putative, expressed |
10037576 | LOC_OS02G17470 | 2 | 10050837..10057784 | GO:0003723 | RNA-binding protein-related, putative, expressed |
22203862 | LOC_OS02G36710 | 2 | 22174407..22181019 | GO:0034622 | galactosyltransferase family protein, putative, expressed |
4063306 | LOC_OS03G08050 | 3 | 4111409..4113361 | GO:0006414 | elongation factor Tu, putative, expressed |
4063306 | LOC_Os03G07994 | 3 | 4089784..4086997 | Ë— | expressed protein |
4063306 | LOC_Os03G08000 | 3 | 4090003..4094134 | Ë— | expressed protein |
4063306 | LOC_Os03G08010 | 3 | 4095194..4097239 | Ë— | elongation factor Tu, putative, expressed |
26223525 | LOC_OS07G43890 | 7 | 26242366..26245311 | GO:0031090 | emp24/gp25L/p24 family protein, putative, expressed |
26223525 | LOC_Os07G43870 | 7 | 26230679..26240915 | Ë— | heat shock protein DnaJ, putative, expressed |
3016420 | LOC_Os08G05670 | 8 | 3038465..3031282 | Ë— | HEAT repeat family protein, putative, expressed |
3016420 | LOC_Os08G05530 | 8 | 2965358..2968015 | Ë— | LSM domain containing protein, expressed |
3016420 | LOC_Os08G05570 | 8 | 2977391..2982700 | Ë— | monodehydroascorbate reductase, putative, expressed |
9602407 | LOC_Os09G15790 | 9 | 9643529..9646172 | GO:0003924 | ras-related protein, putative, expressed |
9602407 | LOC_Os09G15775 | 9 | 9636409..9637761 | Ë— | expressed protein |
9602407 | LOC_Os09G15760 | 9 | 9629854..9631896 | Ë— | expressed protein |
9602407 | LOC_OS09G15770 | 9 | 9634451..9638121 | Ë— | CPuORF13 - conserved peptide uORF-containing transcript, expressed |
9602407 | LOC_Os09G15720 | 9 | 9595103..9593570 | Ë— | expressed protein |
23184140 | LOC_OS11G38959 | 11 | 23184447..23187634 | GO:0003723 | 40S ribosomal protein S9-2, putative, expressed |
23184140 | LOC_Os11g38970 | 11 | 23189532..23190792 | Ë— | expressed protein |
23184140 | LOC_Os11g38990 | 11 | 23212467..23217461 | Ë— | peptidyl-prolyl cis-trans isomerase, putative, expressed |
23184140 | LOC_Os11g38880 | 11 | 23142279..23140918 | Ë— | hypothetical protein |
23184140 | LOC_Os11g38910 | 11 | 23166977..23167787 | Ë— | pyruvate decarboxylase isozyme 1, putative, expressed |
23184140 | LOC_Os11g38930 | 11 | 23176604..23178856 | Ë— | tRNA-splicing endonuclease subunit Sen2, putative, expressed |
60526 | LOC_Os10g01030 | 10 | 40060..38648 | Ë— | hypothetical protein |
60526 | LOC_Os10g01010 | 10 | 22576..22214 | Ë— | transposon protein, putative, Ac/Ds sub-class, expressed |
60526 | LOC_Os10g01110 | 10 | 103441..100327 | Ë— | OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed |
60526 | LOC_Os10g01080 | 10 | 82250..80964 | Ë— | SOR/SNZ family protein, putative, expressed |
60526 | LOC_Os10g01060 | 10 | 67119..72971 | Ë— | protein kinase family protein, putative, expressed |
60526 | LOC_Os10g01044 | 10 | 58337..45941 | Ë— | isoflavone reductase, putative, expressed |
25110946 | LOC_Os11g41820 | 11 | 25153456..25148703 | GO:0003723 | RNA recognition motif containing protein, expressed |
8640260 | LOC_Os11g15230 | 11 | 8598973..8596981 | Ë— | expressed protein |
8640260 | LOC_Os11g15280 | 11 | 8635205..8631629 | Ë— | TNP1, putative, expressed |
13737035 | LOC_Os12g24170 | 12 | 13782378..13761534 | Ë— | beta-galactosidase precursor, putative, expressed |
13737035 | LOC_Os12g24080 | 12 | 13697068..13702579 | Ë— | HECT-domain domain containing protein, expressed |
13737035 | LOC_Os12g24130 | 12 | 13735026..13738628 | Ë— | expressed protein |
22868909 | LOC_Os12g37210 | 12 | 22827572..22824580 | Ë— | expressed protein |
12255959 | LOC_Os12g21789 | 12 | 12267520..12264653 | Ë— | expressed protein |
12255959 | LOC_Os12g21710 | 12 | 12204428..12208058 | Ë— | nnrU, putative, expressed |