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Table 2 Proteins identified as pathogenicity biomarkers in Bursaphelenchus xylophilus secretome. Common IDs in different studies are in italics. aCorrespondence determined by BLASTp analyses in this study

From: Pine wilt disease: what do we know from proteomics?

Activity

Description

Original code

Best correspondence to B. xylophilus genomic data (PRJEA64437_WBPS17)a

References

ID

% identity

E value

Peptidase

Cysteine peptidase

All_gs454_002631

BXY_0410100.1

100

0.00E + 00

[103]

All_gs454_003203

BXY_0408100.1

100

1.10E-173

All_gs454_002316

BXY_0293600.1

99.5

4.00E-148

All_gs454_004450

BXY_0208100.1

100

1.40E-125

All_gs454_003244

BXY_0866900.1

100

4.00E-142

All_gs454_002475

BXY_0293300.1

96.4

0.00E + 00

BmPt2_003216

BXY_1098600.1

97.7

2.50E-129

BmPt2_000767

BXY_0208100.1

BXY_0208200.1

90.9

0.00E + 00

All_gs454_003032

BXY_1052500.1

99.7

0.00E + 00

BUX.s01288.15

BXY_1052500.1

  

[105]

BUX.s00813.52

BXY_0618800.1

  

BXY_0101000.1

  

[51]

Serine peptidase

All_gs454_001068

BXY_1709000.1

99.4

0.00E + 00

[103]

All_gs454_005249

BXY_1770300.1

100

1.40E-144

All_gs454_005845

BXY_1121800.1

100

2.40E-127

All_gs454_000752

BXY_1545000.1

99.8

0.00E + 00

All_gs454_005600

BXY_0959000.1

100

3.80E-124

All_gs454_007198

BXY_1703500.1

100

1.70E-136

All_gs454_001272

BXY_1122100.1

98.8

0.00E + 00

All_gs454_001797

BXY_0963400.1

96.1

0.00E + 00

All_gs454_001410

BXY_1122200.1

100

0.00E + 00

BXY_0959000.1

  

[104]

BXY_0963700.1

  

[51]

BXY_1121700.1

  

BXY_1703500.1

  

Metallo peptidase

All_gs454_000155

BXY_1014700.1

98.6

0.00E + 00

[103]

All_gs454_001243

BXY_1014200.1

99.6

0.00E + 00

All_gs454_002836

BXY_0363400.1

99.7

0.00E + 00

All_gs454_007821

BXY_0363400.1

100

5.20E-130

All_gs454_007450

BXY_0363400.1

100

2.20E-114

All_gs454_007798

BXY_0884000.1

100

1.80E-118

Aspartic peptidase

All_gs454_002706

BXY_0828700.1

96.8

0.00E + 00

[103]

All_gs454_002182

BXY_1188300.1

97.4

0.00E + 00

All_gs454_002228

BXY_0579700.1

97.9

0.00E + 00

All_gs454_002143

BXY_1325300.1

98.1

1.00E-106

All_gs454_002300

BXY_1188000.1

98.2

0.00E + 00

BXY_0035000.1

  

[104]

BXY_0555800.1

  

BXY_0820600.1

  

BXY_0821000.1

  

BXY_0579700.1

  

[51]

Threonine peptidase

BmPt2_001890

BXY_1438300.1

99.2

5.90E-159

[103]

Glycoside hydrolase

Chitinase

All_gs454_002423

BXY_0052200.1

99.6

7.40E-167

[103]

All_gs454_006276

BXY_1010600.1

98.2

1.00E-143

BmPt2_004053

BXY_1010600.1

90.4

7.50E-79

All_gs454_001611

BXY_1650900.1

99.8

0.00E + 00

Cellulase (GH45)

All_gs454_006369

BXY_0937900.1

100

2.60E-144

[103]

BXY_1261000.1

  

[51]

Alpha-1,4-glucosidase

All_gs454_000105

BXY_0176400.1

99.3

0.00E + 00

Alpha galactosidase

All_gs454_002135

BXY_0833500.1

99.5

0.00E + 00

Fucosidase

All_gs454_002563

BXY_0325000.1

97.8

1.40E-154

Glucan endo-1,3-beta-D-glucosidase

All_gs454_005432

BXY_0535400.1

99.2

0.00E + 00

Glycosyl ceramidase (GH30)

BUX.s00713.1066

BXY_0413000.1

100

0.00E + 00

[105]

Other hydrolase

Acid sphingomyelinase

BXY_0542900.1

  

[104]

Histidine acid phosphatase

BXY_1236200.1

  

Lysozyme-like protein (GH18)

BXY_0522000.1

  

Trehalase (GH37)

BXY_1306200.1

  

Lipase

BXY_1125700.1

  

BXY_0707300.1

  

[51]

BXY_0824600.1

  

BUX.s00961.62

BXY_0630900.1

100

0.00E + 00

[105]

Endopeptidase inhibitor

Serine type

All_gs454_001641

BXY_0363400.1

100

0.00E + 00

[103]

Cysteine-type

All_gs454_009328

BXY_0816900.1

97.7

5.10E-82

All_gs454_014827

BXY_1510800.1

100

1.40E-57

All_gs454_008917

BXY_0510100.1

100

1.40E-65

Oxido reductase

Short-chain dehydrogenase/reductase

BXY_0328000.1

  

[104]

γ-interferon-inducible lysosomal thiol reductase

BXY_0504300.1

  

[51]

Diverse

Signal recognition particle

BXY_1012800.1

  

[104]

Intermediate filament tail domain protein

BXY_1639600.1

  

Integral component of membrane

BXY_0888500.1

  

C-type Lectin

BXY_0360300.1

  

Degenerin unc-8

BXY_1546700.1

  

Structural maintenance of chromosomes protein

BXY_1747100.1

  

Venom allergen-like protein

BXY_1378500.1

  

[51]

Putative proteins with no description

BXY_0073000.1

  

[104]

BXY_1760900.1

  

BXY_0799700.1

  

BXY_0583800.1

  

BXY_0463500.1

  

BXY_0927300.1

  

[51]

BXY_0174200.1

  

BXY_0073000.1

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