Skip to main content

Table 7 RNA editing at positive selection sites

From: Characterization and analysis of multi-organ full-length transcriptomes in Sphaeropteris brunoniana and Alsophila latebrosa highlight secondary metabolism and chloroplast RNA editing pattern of tree ferns

Species

Genes

Positive selection sites

RNA editing

Type

S. brunoniana

atpH

75

TCA (S) → TTA (L)

C-U editing

 

psbB

238

TCA (S) → TTA (L)

C-U editing

 

psbE

30

CCG (P) → CTG (L)

C-U editing

 

psbL

31

CCA (P) → CTA (L)

C-U editing

A. latebrosa

atpH

75

TCA (S) → TTA (L)

C-U editing

 

psaB

255

TCA (S) → TTA (L)

C-U editing

 

psbB

238

TCA (S) → TTA (L)

C-U editing

 

psbE

30

CCG (P) → CTG (L)

C-U editing

 

psbL

31

CCA (P) → CTA (L)

C-U editing

A. spinulosa

atpH

75

TCA (S) → TTA (L)

C-U editing

 

psaB

255

TCA (S) → TTA (L)

C-U editing

 

psbB

238

TCA (S) → TTA (L)

C-U editing

 

psbE

30

CCG (P) → CTG (L)

C-U editing

 

psbL

31

CCA (P) → CTA (L)

C-U editing

 

rbcL

375

CTT (L) → TTT (F)

C-U editing

C. barometz

atpH

75

TCA (S) → TTA (L)

C-U editing

 

psaB

255

TCA (S) → TTA (L)

C-U editing

 

psbB

238

TCA (S) → TTA (L)

C-U editing

 

psbE

30

CCG (P) → CTG (L)

C-U editing

 

psbL

31

CCA (P) → CTA (L)

C-U editing