Table 3 Predicted genes located within the candidate interval of the major QTL in chromosome 5 that have been detected as differentially expressed. Log2(FoldChange) of the differentially expressed genes between the resistant and susceptible genotype for the interaction term genotype x treatment is provided
From: Insights into the early transcriptomic response against watermelon mosaic virus in melon
Gene name | Position (start … end bp) | Description | log2(Fold Change) |
|---|---|---|---|
MELO3C004194 | 24,886,205…24,890,478 | calreticulin | −1.64 |
MELO3C004196 | 24,898,167…24,901,559 | GTP-binding protein SAR1A | −1.52 |
MELO3C004200 | 24,947,277…24,952,407 | E3 SUMO-protein ligase NSE2 | 1.48 |
MELO3C004204 | 24,983,611…24,989,254 | Importin subunit alpha | 2.15 |
MELO3C004219 | 25,131,665…25,134,287 | Dormancy/auxin associated protein | 3.16 |
MELO3C004305 | 26,042,063…26,048,099 | Pre-mRNA-splicing factor SLU7 | 2.97 |
MELO3C004329 | 26,298,777…26,308,596 | Terpene cyclase/mutase family member | −2.59 |
MELO3C004356 | 26,610,676…26,621,447 | “5–3 exoribonuclease” | 1.14 |
MELO3C004366 | 26,689,354…26,697,690 | Prenylyltransferase superfamily protein | 2.15 |
MELO3C004371 | 26,731,110…26,735,263 | Thioredoxin-like protein 1 | −1.24 |
MELO3C004421 | 27,112,362…27,117,173 | L-allo-threonine aldolase | 4.36 |
MELO3C004433 | 27,203,527…27,207,131 | calcium uptake protein 1, mitochondrial-like isoform X1 | 5.18 |
MELO3C004434 | 27,208,137…27,211,375 | Serine-rich protein-like protein | 4.12 |
MELO3C004435 | 27,217,111…27,221,085 | Transmembrane protein | 1.88 |
MELO3C004438 | 27,252,281…27,262,164 | Ubiquitin family protein | 2.30 |
MELO3C004448 | 27,326,640…27,332,555 | DNA helicase | −4.49 |