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Table 1 Summary of read numbers based on the RNA-Seq data from Eucalyptus internodes

From: Transcriptome analysis of the transition from primary to secondary growth of vertical stem in Eucalyptus grandis

 

IN3

IN5

IN7

IN9

IN11

Total reads

18,602,753

23,988,926

19,799,641

16,562,096

17,972,516

Mapped reads

16,329,497

22,228,139

18,706,701

15,671,055

17,081,079

(87.78%)

(92.66%)

(94.48%)

(94.62%)

(95.04%)

Unique matched reads

15,592,203

19,970,855

17,706,827

14,859,830

16,120,472

(81.85%)

(83.25%)

(89.43%)

(89.72%)

(89.70%)

Multi-position matched reads

1,125,528

2,196,171

994,932

807,336

953,109

(5.91%)

(9.15%)

(5.03%)

(4.87%)

(5.30%)

Unmapped reads

2,273,256

1,760,787

1,092,940

891,041

891,437

(12.22%)

(7.34%)

(5.52%)

(5.38%)

(4.96%)

Mapping gene number

22,621

22,638

22,612

22,490

22,258

Mapping-gene percent (%)

61.23%

62.23%

62.28%

62.21%

61.87%