Table 2 Common pool of genes affected by LR identified in both interactions (CP and ICP) and both time points (20 hpt and 36 hpt)
No | Gene ID | Encoded protein | Differentially expressed in comparison: |
|---|---|---|---|
1 | SECCE7Rv1G0458590 | Ice recrystallization inhibition protein-like protein | D33_ICP_20; D33_CP_20 D33_CP_36; D39_CP_36 D39_ICP_36 |
2 | SECCE3Rv1G0160690 | basic helix-loop-helix (bHLH) DNA-binding superfamily | D33_ICP_36; D33_CP_36 D39_ICP_20; D39_CP_20 |
3 | SECCE7Rv1G0460350 | Ammonium transporter | D39_ICP_20; D39_CP_20 D39_ICP_36; D39_CP_36 L318_ICP_36; L318_CP_36 |
4 | SECCE2Rv1G0142080 | 1-deoxy-D-xylulose 5-phosphate synthase | D33_ICP_20; D39_ICP_20 D39_CP_20; D39_ICP_36 D39_CP_36 |
5 | SECCE5Rv1G0322060 | Indole-3-glycerol phosphate synthase | D39_ICP_20; D39_CP_20 D39_ICP_36; D39_CP_36 |
6 | SECCE2Rv1G0117990 | Cysteine protease | L318_ICP_20; L318_CP_20 L318_ICP_36; L318_CP_36 |
7 | SECCE7Rv1G0460090 | Aldo/keto reductase family protein | D39_ICP_20; D39_CP_20 D39_ICP_36; D39_CP_36 |
8 | SECCE6Rv1G0429650 | Endo-1,3-beta-glucanase | D39_ICP_20; D39_CP_20 D39_ICP_36; D39_CP_36 L318_CP_20; L318_CP_36 |
9 | SECCEUnv1G0532270 | tRNA-specific 2-thiouridylase MnmA | D39_ICP_20; D39_CP_20 D39_ICP_36; D39_CP_36 L318_CP_36 |
10 | SECCEUnv1G0568520 | WIR1a | D39_ICP_20; D39_CP_20 D39_ICP_36; D39_CP_36 L318_CP_36 |
11 | SECCEUnv1G0532290 | WIR1a | D39_ICP_20; D39_CP_20 D39_ICP_36; D39_CP_36 |
12 | SECCE5Rv1G0302060 | WIR1a | D39_ICP_20; D39_CP_20 D39_ICP_36; D39_CP_36 L318_CP_36 |
13 | SECCE4Rv1G0285880 | Cytochrome P450, putative | D39_ICP_20; D39_CP_20 D39_ICP_36; D39_CP_36 |
14 | SECCE7Rv1G0462250 | Cytochrome P450 | D39_ICP_20; D39_CP_20 D39_ICP_36; D39_CP_36 |
15 | SECCE4Rv1G0248210 | Cytochrome P450 | D33_ICP_36; D39_ICP_20 D39_CP_20; D39_CP_36 L318_CP_36 |