Table 1 Statistical qualification of high throughput sequencing data
From: Genome-wide analysis of long noncoding RNAs in response to salt stress in Nicotiana tabacum
Sample | Raw reads | Clean reads | Mapped | Uniquely mapped |
|---|---|---|---|---|
RCK-1 | 78493782 | 76715372 | 69240868(90.26%) | 62395517(81.33%) |
RCK-2 | 90652286 | 89528660 | 80175991(89.55%) | 74115789(82.78%) |
RCK-3 | 83489260 | 82312440 | 73990643(89.89%) | 68268149(82.94%) |
R12h-1 | 85202208 | 84101512 | 78435918(93.26%) | 72423156(86.11%) |
R12h-2 | 88640876 | 87377838 | 79468781(90.95%) | 73413593(84.02%) |
R12h-3 | 86437516 | 85094334 | 76240385(89.6%) | 70287421(82.6%) |
R3d-1 | 95305884 | 93888676 | 82728419(88.11%) | 76105824(81.06%) |
R3d-2 | 100594106 | 99110234 | 93446449(94.29%) | 86215575(86.99%) |
R3d-3 | 85991280 | 84806168 | 71124300(83.87%) | 65374090(77.09%) |
R7d-1 | 86545194 | 85415952 | 77896434(91.2%) | 71575984(83.8%) |
R7d-2 | 88638568 | 87624378 | 83018430(94.74%) | 76613532(87.43%) |
R7d-3 | 84833002 | 83686042 | 79242374(94.69%) | 72988336(87.22%) |
LCK-1 | 91605898 | 90042102 | 87505706(97.18%) | 75753072(84.13%) |
LCK-2 | 95443466 | 94230186 | 90449338(95.99%) | 81250537(86.23%) |
LCK-3 | 100102960 | 98156830 | 95110331(96.90%) | 83578793(85.15%) |
L12h-1 | 106122454 | 104127380 | 100634471(96.65%) | 88417828(84.91%) |
L12h-2 | 101236356 | 99884132 | 96678666(96.79%) | 84497881(84.60%) |
L12h-3 | 96617204 | 94803582 | 91850228(96.88%) | 81047828(85.49%) |
L3d-1 | 99983868 | 98805920 | 95909622(97.07%) | 83805871(84.82%) |
L3d-2 | 93316850 | 91999278 | 89195563(96.95%) | 77161824(83.87%) |
L3d-3 | 103412860 | 101716588 | 98694012(97.03%) | 85989070(84.54%) |
L7d-1 | 100040082 | 98593216 | 95527067(96.89%) | 82910848(84.09%) |
L7d-2 | 86846072 | 85786174 | 82748442(96.46%) | 74186582(86.48%) |
L7d-3 | 87868758 | 86879714 | 84326691(97.06%) | 73351819(84.43%) |