Whole-genome resequencing and transcriptome analyses of four generation mutants to reveal spur-type and skin-color related genes in apple (Malus domestica Borkh. Cv. Red delicious)

Table 1 Summary of sequencing results for ‘Red Delicious’ and its four generation mutants

Sample	Common name	Mapped reads	Average depth (×)	GC Content (%)	SNPs	InDels	SVs
G0	Red Delicious	342,088,246 (96.90%)	74.00	38.18	4,682,649	752,869	49,921
G1	Starking Red	217,331,395 (97.40%)	46.00	38.23	4,661,094	743,012	42,305
G2	Starkrimson	228,859,957 (97.67%)	48.00	38.22	4,491,880	710,292	42,453
G3	Campbell Redchief	214,202,597 (97.72%)	46.00	38.27	4,662,134	743,717	41,914
G4	Vallee spur	227,272,380 (97.60%)	49.00	38.29	4,667,880	745,759	41,760

ISSN: 1471-2229