Table 5 Genes identified associated with bean rust DS partial resistance and incomplete hypersensitive resistance, their annotation based on the Phaseolus vulgaris genome v2.1, and functional categorization according to MapMan/Mercator. NA – not available
GWAS | Marker name | Gene ID | Gene annotation | MapMan/Mercator functional categorization |
|---|---|---|---|---|
Partial Resistance | SNP03379 | Phvul.008G061600 | NA | Not classified |
SNP03383 | NA | NA | Â | |
DART07386 | Phvul.008G065600 | Beta-amylase 7 | Enzyme classification. EC_3.2 glycosylase & BZR-type transcription factor | |
SNP03385 | Phvul.008G065700 | Acyl-CoA thioesterase family protein | Not classified | |
DART07388 | NA | NA | NA | |
DART07389 | NA | NA | NA | |
Incomplete hypersensitive resistance | DART05945 | Phvul.006G152200 | NA | Not classified |
DART06294 | Phvul.007G031000 | Protein kinase superfamily protein | Enzyme classification. LRK10-1-like protein kinase & EC_2.7 transferase transferring phosphorus-containing group | |
DART06303 | Phvul.007G032266 | Alpha/beta hydrolase | Not classified | |
SNP03819 | Phvul.008G253400 | Eukaryotic aspartyl protease family protein | Enzyme classification. A1-class (Pepsin) protease & EC_3.4 hydrolase acting on peptide bond (peptidase) | |
SNP03850 | Phvul.008G270700 | Co-factor for nitrate, reductase and xanthine dehydrogenase 5 (MOCS3, UBA4, moeB) | Not classified |