Table 2 Classification of samples used for methylome detection and transcriptome analysis
From: Genetic insights into the dissolution of dioecy in diploid persimmon Diospyros oleifera Cheng
Sex phenotype of a tree | Groups | Samples within each group |
|---|---|---|
Classification of samples used for methylome detection | ||
 Gynoecious (OGI−) | G_F (gynoecious_female floral buds) | 11F; 21F; 186F |
G_S (gynoecious_stems of immature flowering shoots) | 11S; 21S; 186S | |
 Androecious (OGI+) | A_M (androecious_male floral buds) | 13 M; 65 M; 188 M |
A_S (androecious_stems of immature flowering shoots) | 13S; 65S; 188S | |
 Monoecious (OGI+) | M_F (monoecious_female floral buds) | 108F; 168F |
M_M (monoecious_male floral buds) | 108Â M; 168Â M | |
M_S (monoecious_stems of immature flowering shoots) | 108S; 168S | |
 Andromonoecious (OGI+) | AM_M (andromonoecious_male floral buds) | 206 M with three biological replicates |
AM_H (andromonoecious_hermaphroditic floral buds) | 206H with two biological replicates | |
AM_L (andromonoecy_leaf) | 206L with three biological replicates | |
 Pseudo-monoecious (OGI−) | PM_SF (pseudo-monoecy_solitary female floral buds) | PM_SF |
PM_MF (pseudo-monoecy_middle floral buds obtained from the three flower cymes) | PM_MF | |
PM_LF (pseudo-monoecy_lateral floral buds obtained from the three flower cymes) | PM_LF | |
PM_S (pseudo-monoecy_stems of immature flowering shoots) | PM_S | |
Classification of samples used for transcriptome analysis | ||
 Gynoecious (OGI−) | G_F (gynoecy_female floral buds) | 11F; 21F; 186F |
G_S (gynoecy_stems of immature flowering shoots) | 11S; 21S; 186S | |
 Androecious (OGI+) | A_M (androecy_male floral buds) | 13 M; 65 M; 188 M |
A_S (androecy_stems of immature flowering shoots) | 13S; 65S; 188S | |
 Monoecious (OGI+) | M_F (monoecy_female floral buds) | 108F; 136F; 168F |
M_M (monoecy_male floral buds) | 108Â M; 136Â M; 168Â M | |
 Andromonoecious (OGI+) | AM_M (andromonoecy_male floral buds) | 206 M with three biological replicates |
AM_H (andromonoecy_hermaphroditic floral buds) | 206H with three biological replicates | |
 Pseudo-monoecious (OGI−) | PM_SF (pseudo-monoecy_solitary female floral buds) | PM_SF |
PM_LF (pseudo monoecy_lateral floral buds obtained from the three flower cymes) | PM_LF | |