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Fig. 8 | BMC Plant Biology

Fig. 8

From: Genome-wide identification, characterization, and expression analysis of the sweet potato (Ipomoea batatas [L.] Lam.) ARF, Aux/IAA, GH3, and SAUR gene families

Fig. 8

STRINGdb Protein–protein interaction diagram illustrating predicted interactions between the sweet potato auxin signalling genes based on their homology to A. thaliana proteins and their interactions. The nodes represent the auxin signalling proteins and the edges represent predicted interactions. No more than five interactors were shown in the first shell and zero interactors were shown for the second shell. Coloured nodes are those enriched with a Gene Ontology (GO) term with an FDR < 0.01—red: GO:0009734 (Auxin-activated signaling pathway); blue: GO:0009723 (Response to ethylene); green: GO:0010102 (Lateral root morphogenesis); purple: GO:0016881 (Acid-amino acid ligase activity). White nodes had no significant GO enrichment. The DEGs were prefixed with the species abbreviation, Ib a Up-regulated DEGs b Down-regulated DEGs. (inset) The thicknesses of the edges are proportional to the confidence of the prediction (only medium confidence score of 0.400 or higher shown)

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BMC Plant Biology

ISSN: 1471-2229

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