Table 4 Summary of NLR and kinase genes detected in the YR63 pangenome loci
Gene structure | Gene ID | Cultivar | Length (bp) | Encoded protein | Upregulated |
|---|---|---|---|---|---|
NLR | TraesCS7B03G0004800LC | Chinese Spring, Svevo | 630 | NB-ARC domain protein | |
TRITD7Bv1G000550 | Svevo | 644 | NBS-LRR disease resistance protein-like protein G | ||
TRITD7Bv1G000560 | Svevo | 809 | NB-ARC domain protein | ||
TraesCS7B03G0007100LC | Chinese Spring | 732 | NB-ARC domain protein | ||
TraesMAC7B01G002800 | Mace | 1098 | NB-ARC domain protein | ||
TraesCS7B03G0005200LC | Chinese Spring, Svevo | 2319 | Putative disease-resistance protein | ||
TraesCS7B03G0005300 | Chinese Spring, Norin61, Spelta, Stanley | 2469 | Putative disease resistance protein | + | |
TraesMAC7B01G002900 | Mace | 2862 | NB-ARC domain protein | ||
TraesMAC7B01G004100 | Mace | 3045 | Putative disease-resistance protein | ||
TraesJUL7B01G003200 | Julius | 3681 | NB-ARC domain protein | ||
TRITD7Bv1G000660 | Svevo | 4071 | Disease resistance protein (TIR-NBS-LRR) | + | |
TraesJUL7B01G006900 | Julius, Mace, Stanley | 4260 | Disease resistance protein RGA2-like | ||
TraesCS7B03G0013500 | Chinese Spring | 4260 | NBS-LRR | ||
TraesCS7B03G0006500 | Chinese Spring, Svevo | 5022 | NB-ARC LRR protein | + | |
TRIDC7BG000370 | Jagger, Landmark, Lancer, Zavitan | 12433 | Putative disease resistance protein RGA3-like | + | |
TraesCS7B03G0006700 | Chinese Spring, Mace, Norin61, Stanley, Svevo | 14204 | NB-ARC LRR protein | ||
Kinase | TraesCS7B03G0005000LC | Chinese Spring, Svevo | 597 | LRR receptor-like protein kinase | |
TRITD7Bv1G000640 | Svevo | 1119 | LRR receptor-like protein kinase | ||
TraesCS7B03G0005400 | Chinese Spring, Norin61, Stanley | 2437 | Kinase protein | ||
TraesCS7B03G0012700 | Chinese Spring, Julius, Mace, Norin61, Spelta, Stanley, Svevo, Zavitan | 4546 | ATP-dependent 6-phosphofructokinase | + | |
TraesCS7B03G0006400 | Chinese Spring, Julius, Mace, Norin61, Spelta, Stanley, Svevo, Zavitan | 6334 | Kinase protein | + | |
TRITD7Bv1G000690 | Svevo | 6910 | LRR receptor-like protein kinase |