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Table 1 DEGs in plant hormone signal transduction pathways

From: Multiplex CRISPR-Cas9 knockout of EIL3, EIL4, and EIN2L advances soybean flowering time and pod set

Gene ID

FDR

Log2FC

Annotation

Signaling pathway

Glyma.03G063900

2.14E-13

1.04

AUX1

auxin

Glyma.13G319700

2.28E-11

1.07

AUX1

auxin

Glyma.02G142400

3.69E-07

1.07

Aux/IAA

auxin

Glyma.07G018100

1.65E-05

1.01

Aux/IAA

auxin

Glyma.07G034200

1.99E-13

1.00

Aux/IAA

auxin

Glyma.19G161100

6.50E-120

1.80

Aux/IAA

auxin

Glyma.20G210400

3.57E-45

1.33

Aux/IAA

auxin

Glyma.08G155700

1.07E-05

1.03

SAUR

auxin

Glyma.12G034100

3.66E-05

1.03

SAUR

auxin

Glyma.03G241700

1.28E-05

1.03

AHP

cytokinin

Glyma.05G158900

1.94E-17

-1.17

B-ARR

cytokinin

Glyma.08G116700

4.48E-17

-1.12

B-ARR

cytokinin

Glyma.01G204400

3.29E-51

-2.50

JAZ

jasmonic acid

Glyma.11G038600

9.66E-48

-1.97

JAZ

jasmonic acid

Glyma.13G112000

4.38E-24

-1.14

JAZ

jasmonic acid

Glyma.13G116100

4.23E-104

-1.42

JAZ

jasmonic acid

Glyma.15G166800

3.06E-08

-1.20

MYC2

jasmonic acid

Glyma.09G184300

5.03E-137

-4.93

TGA6

salicylic acid

Glyma.06G184400

3.94E-19

2.08

BRI1

brassinosteroid

Glyma.18G254000

3.51E-09

1.42

BRI1

brassinosteroid

Glyma.18G254500

1.28E-10

1.53

BRI1

brassinosteroid

Glyma.18G254600

5.28E-08

1.27

BRI1

brassinosteroid

Glyma.19G081200

2.54E-21

1.22

BRI1

brassinosteroid

Glyma.11G083900

1.14E-08

-1.25

SBP13

brassinosteroid

Glyma.13G177400

5.57E-20

-1.24

SBP1

brassinosteroid

  1. The character "glyma.Wm82.gnm2." are omitted before gene IDs. FDR, false discovery rate; FC, fold change: FPKM of triple mutants divided by FPKM of control; AHP, histidine-containing phosphotransfer protein; Aux/IAA, auxin-responsive protein IAA; AUX1, auxin influx carrier; B-ARR, two-component response regulator ARR-B family; BRI1, protein brassinosteroid insensitive 1; JAZ, jasmonate ZIM domain-containing protein; MYC2, transcription factor MYC2; SAUR, SAUR family protein; SBP, squamosa promoter binding like protein; TGA, transcription factor TGA. The complete annotations for each DEG are listed in Table S4