Table 5 Conserved domain report of genes with high level gene ontology term recommended for future breeding

4324824

EtWOX9

homeodomain super family

DNA binding domains involved in the transcriptional regulation of key developmental processes

40–213

8.3E-11

58

201

4326871

EtbZIP-1

bZIP plant GBF1

Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors. DNA-binding and dimerization domain. GBFs are involved in developmental and physiological processes

124–237

8.5E-11

38

158

4330838

EtbZIP-23

bZIP plant BZIP46

Similar description with bZIP-1

745–879

2.2E-20

45

344

4334553

EtNAC2

NAM

No apical meristem (NAM) protein involved in plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia. NAM plays a role in determining positions of meristems and primordial

49–420

1.0E-61

124

294

4337721

EtDRM3

Dcm super family

site specific DNA- cytosine methylase (replication, recombination and repair)

1429–1785

1.5E-03

119

597

4339974

EtDREB1C

AP2 super family

DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). EREBP involved in stress response, contain a single copy of the AP2 domain. APETALA2-like proteins, which play a role in plant development contain two copies

121–213

3.1E-10

31

218

4347620

DREB1A

AP2

Description similar with DREB1C

889–1071

1.4E-20

61

1052

AP2

2416–2613

1.2E-13

66

AP2

151–333

3.5E-10

61

AP2 super family

1630–1812

1.7E-09

61

4324418

EtDREB2A

AP2

DNA-binding domain in plant proteins such as APETALA2 and EREBPs

169–354

2.3E-31

61

372

4331194

EtPIP1-3

MIP

Major intrinsic protein (MIP) family that exhibit essentially two distinct types of channel properties: (1) specific water transport and (2) small neutral solutes transport

136–825

2.0E-99

230

288

4330049

EtPIP2-2

MIP

Similar with EtPIP1-3

97–810

1.4E-92

238

288

4330248

EtPIP1-1

MIP

Similar with EtPIP1-3

136–825

1.7E-99

230

289

4336249

EtNRT1

MFS super family

Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

1714–3261

3.0E-161

516

1613

MFS super family

70–1569

2.0E-110

500

MFS super family

3283–4719

2.0E-108

479

4345581

EtCPP1/V5B

CPP1-like

CHAPERONE-LIKE PROTEIN OF POR1 (CPP1), is an essential protein for chloroplast development, plays a role in the regulation of POR (light-dependent protochlorophyllide oxidoreductase) stability and function

247–672

2.6E-46

142

1613

4335799

PLN00046

PLN00046

photosystem I reaction center subunit O

4–429

1.1E-72

142

242

4333501

MATE

MATE_eukaryotic

Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family. MATE has been identified as a large multigene family linked to disease resistance. Acts as solute transporters responsible for secretion of cationic drugs. Has also a role in iron homeostatis under osmotic stress

31–1332

2.0E-150

651

144

A1904 super family

K + -dependent Na + /Ca + exchanger; [Transport and binding proteins, Cations and iron carrying compounds]

52–702

2.5E-04

217

4329854

GNT3

Glyco_transf_17

Glycosyltransferase family 17. This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase. This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans

211–1254

0.0

348

388

4340585

EtRING

RING-H2_EL5-like

RING finger, H2 subclass, found in rice E3 ubiquitin-protein ligase EL5 and similar proteins. EL5 acts as an anti-cell death enzyme

478–609

7.8E-22

407

4341520

EtSAP8

ZnF_AN1

AN1-like Zinc finger; Zinc finger at the C-terminus of An1, a ubiquitin-like protein in Xenopus laevis

334–426

1.9E-08

31

141

zf-A20

A20-like zinc finger; The A20 Zn-finger is a Ubiquitin Binding Domain

43–114

8.4E-08

24

4344714

AHL-23

DUF296

This domain is found in proteins that contain AT-hook motifs, which suggests a role in DNA-binding for the proteins as a whole

283–528

2.1E-21

82

287

4346187

EtCPK21_like

STKc_CAMK

The catalytic domain of CAMK family Serine/Threonine Kinases. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation

244–1077

1.9E-125

278

618

FRQ1 super family

Ca2 + -binding protein, EF-hand superfamily

1291–1776

4.0E-22

162