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Fig. 5 | BMC Plant Biology

Fig. 5

From: Transcriptomic characterization of Trichoderma harzianum T34 primed tomato plants: assessment of biocontrol agent induced host specific gene expression and plant growth promotion

Fig. 5

The Vein digrammes showing the presence of common and shared gene-specific family related transcription factors. The DEGs were sorted based on FDR corrected and raw data based experimentally derived (Ttest) based calculated p-values. We compared the DEGs specific to gene-families with the maximum and total possible ESTs specific and related to a particular gene families. The ESTs were sorted based on gene-specific family related function domain and were compared with the DEGs sorted based on (Pcal < 0.05, Pcal < 0.01, Padj < 0.05). a The Vein digramme sorting the AP2/ERF family specific ESTs available across the tomato genome and their filtering from the significant DEGs (Pcal < 0.05, pcal < 0.01, and Padj < 0.05). b The Vein digramme sorting the NAC family specific ESTs available across the tomato genome and their filtering from the significant DEGs (Pcal < 0.05 and Padj < 0.05). c The Vein digramme sorting the Plant defensins family specific ESTs available across the tomato genome and their filtering from the significant DEGs (Pcal < 0.05, Pcal < 0.01, and Padj < 0.05). d The Vein digramme sorting the MADS box family specific ESTs available across the tomato genome and their filtering from the significant DEGs (Pcal < 0.05, Pcal < 0.01, Padj < 0.05, and Padj < 0.01). e Vein digramme showing the C2H2 Zinc Finger family. f The Vein digramme showing the MYB members. g The Vein digramme showing the WRKY members

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