Fig. 4

The vein digrames showing sorting of the significant genes based on experimentally calculated (Student's T Test and the FDR adjusted probability score values. a The vein digramme showing the proportion of common 156 genes sorted based on p_adj-value < 0.05, p_cal-value < 0.05, and p_cal-value < 0.01). b The Vein digramme showing the proportion of shared 13 significant genes differentially expressed based on cross comparision of FDR corrected and FDR underestimated p-values and at much more stringent-cut-off scores of the experimentally derived p-values. c The vein digramme showing the proportion of significant 22 genes out of the total genome-wide expressed genes and were sorted based on P_cal < 0.05, P_cal < 0.01, P_adj < 0.05, and too much stringent and lower cut-off score values of experimentally derived raw data based P_cal < 0.001values. d The Vein digrammes showing the proportion of the significant DEGs (both upregulated and the downregulated) across the two cross-comparable groups (un-inoculated control vs T. harzianum T34 primed tomato plants) and were compared to the total genome-wide expressed genes acoss the tomato genome under the defined experimental conditions. The data was filtered at P_cal < 0.05 and P_cal < 0.01 and the FDR corrected P_adj < 0.05