Table 2 List of annotated genes in the chloroplast genomes of four newly sequenced Sanicula taxa and one sample of Eryngium foetidum

Photosynthesis

Subunits of photosystem I

psaA, psaB, psaC, psaI, psaJ

Subunits of photosystem II

psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ

Subunits of NADH dehydrogenase

ndhA*, ndhB*⁽²⁾, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK

Subunits of cytochrome b/f complex

petA, petB*, petD, petG, petL, petN

Subunits of ATP synthase

atpA, atpB, atpE, atpF*, atpH, atpI

Large subunit of rubisco

rbcL

Self-replication

Proteins of large ribosomal subunit

rpl14, rpl16*, rpl2*⁽²⁾, rpl20, rpl22, rpl23⁽²⁾, rpl32, rpl33, rpl36

Proteins of small ribosomal subunit

rps11, rps12**⁽²⁾, rps14, rps15, rps16*, rps18, rps19, rps2, rps3, rps4, rps7⁽²⁾, rps8

Subunits of RNA polymerase

rpoA, rpoB, rpoC1*, rpoC2

Ribosomal RNAs

rrn16S⁽²⁾, rrn23S⁽²⁾, rrn4.5S⁽²⁾, rrn5S⁽²⁾

Transfer RNAs

trnA-UGC*⁽²⁾, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnG-GCC, trnH-GUG, trnI-CAU⁽²⁾, trnI-GAU*⁽²⁾, trnL-CAA⁽²⁾, trnL-UAG, trnM-CAU, trnN-GUU⁽²⁾, trnP-UGG, trnQ-UUG, trnR-ACG⁽²⁾, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU^▲, trnT-UGU, trnV-GAC⁽²⁾, trnW-CCA, trnY-GUA, trnfM-CAU

Other genes

Maturase

matK

Protease

clpP1**

Envelope membrane protein

cemA

Acetyl-CoA carboxylase

accD

c-type cytochrome synthesis gene

ccsA

Genes of unknown function

Conserved hypothetical gene

ycf1, ycf15, ycf2⁽²⁾, ycf3**, ycf4