Table 2 Main enriched Go categories and KEGG pathway in the 631 common response genes

Up-regulated

genes

ko00630

glyoxylate and dicarboxylate metabolism

1.05E-06

ko00232

caffeine metabolism

5.87E-05

ko00620

pyruvate metabolism

0.001277

ko00220

arginine biosynthesis

0.001848

ko01200

carbon metabolism

0.002738

ko00410

beta-Alanine metabolism

0.004164

ko00910

nitrogen metabolism

0.004964

ko01230

biosynthesis of amino acids

0.008801

ko00280

valine, leucine and isoleucine degradation

0.018952

ko00310

lysine degradation

0.018952

ko00770

pantothenate and CoA biosynthesis

0.026426

ko00071

fatty acid degradation

0.028025

ko00380

tryptophan metabolism

0.033005

ko00360

phenylalanine metabolism

0.036468

ko01210

2-Oxocarboxylic acid metabolism

0.040942

ko00561

glycerolipid metabolism

0.042773

ko00592

alpha-Linolenic acid metabolism

0.043698

Down-regulated

genes

ko03030

DNA replication

6.91E-21

ko03410

base excision repair

3.82E-09

ko00240

pyrimidine metabolism

6.42E-07

ko03430

mismatch repair

3.14E-06

ko03420

nucleotide excision repair

1.51E-05

ko00230

purine metabolism

1.67E-05

ko03008

ribosome biogenesis in eukaryotes

0.000124

ko03440

homologous recombination

0.000218

ko03010

ribosome

0.011873

ko03450

non-homologous end-joining

0.014704

ko04075

plant hormone signal transduction

0.039937