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Table 1 Main enriched GO categories in the 631 common response genes

From: Transcriptomic analysis provides insight into the genetic regulation of shade avoidance in Aegilops tauschii

Expression pattern

ID

Description

Q value

Up-regulated

genes

GO:0004197

cysteine-type endopeptidase activity

0.001581

GO:0005615

extracellular space

0.003188

GO:0005764

lysosome

0.003842

GO:0004674

protein serine/threonine kinase activity

0.013115

GO:0009514

glyoxysome

0.017737

Down-regulated

genes

GO:0006270

DNA replication initiation

9.17E-14

GO:0006334

nucleosome assembly

8.2E-11

GO:0006260

DNA replication

3.26E-08

GO:0007049

cell cycle

1.05E-06

GO:0006342

chromatin silencing

5.13E-05

GO:0032508

DNA duplex unwinding

0.000245

GO:0071897

DNA biosynthetic process

0.003908

GO:0007018

microtubule-based movement

0.009109

GO:0006268

DNA unwinding involved in DNA replication

0.011548

GO:0048366

leaf development

0.028369

GO:0007076

mitotic chromosome condensation

0.031739

GO:0009886

post-embryonic animal morphogenesis

0.047169

GO:0045740

positive regulation of DNA replication

0.047882

GO:0034644

cellular response to UV

0.047882

  1. The Q value is the P value of the enrichment corrected with the Bonferroni method for multiple testing