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Table 4 Fifty-seven SSRs (simple sequence repeat) identified in eighteen of twenty MTP sequences in Eucalyptus grandis

From: Genome-wide identification and expression profile analysis of metal tolerance protein gene family in Eucalyptus grandis under metal stresses

Gene Name

SSR Motifs

EgMTP1.4

(CAT)4

EgMTP1.6

(CAT)4

EgMTP1.2

(CAT)4

EgMTP1.1

(CAT)4

EgMTP1.3

(CAT)4-(AAAT)3

EgMTP12

(GGC)6-(CAT)4- (TTCCCA)4

EgMTP5

(CT)8-(TG)8-(AAG)4-(TCA)4-(AAAG)3- (TTAT)3-(GAGCA)3

EgMTP1.7

(TTG)4- (AATT)4- (ATTT)3- (AATT)3- (TTTA)3-(TGATG)3-(GGTCAC)3

EgMTP9.1

(GAC)4

EgMTP9.3

(ACC)6-(TGTA)9-(ATGG)4-(GAAAAA)3

EgMTP4

(ATC)4-(CAT)4

EgMTP6

(TTTA)3

EgMTP8.2

(CT)12

EgMTP1.5

(CGC)6- (CAT)4- (TTTC)5

EgMTP9.2

(TC)20- (GA)19-(CGA)4-(TTTTC)3

EgMTP7

(CT)7-(GA)15-(CT)16- (TC)15-(CGA)7-(CTC)4-(CGA)7-(ATT)6-(GATG)3- (CTCC)4-(TTTTA)3

EgMTP8.1

(TC)12-(TC)10-(GA)11- (GAG)4- (TCCGT)4

EgMTP11.1

(TC)9