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Table 2 Genetic diversity parameters of 159 wild tea germplasm resources in Guizhou Plateau

From: Population structure analysis to explore genetic diversity and geographical distribution characteristics of wild tea plant in Guizhou Plateau

Type

 

Number

Ho

Fis

Tajima’s D

MAF

Pi

Species

C. tachangensis

101

0.080b

0.652a

0.650

0.143b

0.220a

C. gymnogyna

58

0.087a

0.577b

0.721

0.148a

0.219a

Altitude

H1

39

0.079c

0.567a

0.718

0.126c

0.185c

H2

65

0.088a

0.625a

0.543

0.148a

0.227a

H3

55

0.086b

0.620a

0.627

0.144b

0.215b

Classes

CR

92

0.083b

0.628a

0.585

0.141b

0.217a

SR

67

0.088a

0.604a

0.736

0.144a

0.215a

Areas

I

48

0.086b

0.624a

0.404

0.145a

0.221a

II

44

0.080c

0.602a

0.303

0.132c

0.198c

III

46

0.089a

0.603a

0.591

0.143b

0.214b

IV

21

0.088a

0.586a

0.539

0.143b

0.213b

All

all

159

0.085

0.644

0.941

0.149

0.230

  1. Pi nucleotide diversity, Ho observed heterozygosity, MAF minor allele frequency, Fis inbreeding coefficient. In the same type and line, the different letters indicate a significant difference at P = 0.05 level by t-test. Species contain C. tachangensis and C. gymnogyna. Altitude contains H1, H2 and H3, which are the first (> 1400 m), second (1400–1100 m), and third (< 1100 m) altitude gradients, respectively. Classes contain CR (Carbonate Rock) and SR (Silicate Rock). Areas contain I Dolomite sub-suitable area, II Dolomitic limestone suitable area, III Clastic rock most suitable area, and IV Purple clastic rock suitable area