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Table 1 Gene composition of the mitogenome of A. longiglumis. For lengths and positions of genes see Additional file 2: Table S3

From: The mitochondrial genome of the diploid oat Avena longiglumis

 

Group of genes

Genes (Number of copies in parentheses if > 1)

Protein coding genes (PCGs)

ATP synthase

atp1 (× 3), atp4 (× 2), atp6, atp8, atp9

NADH dehydrogenase

nad1, nad2, nad3, nad4, nad4L, nad5, nad6, nad7, nad9

Cytochrome c biogenesis

cob

Ubiquinol cytochrome c reductase

ccmB, ccmC, ccmFC, ccmFN

Cytochrome c oxidase

cox1, cox2, cox3

Maturases

matR

Transport membrane protein

mttB

Large subunit of ribosome

rpl5, rpl16, rpl2 (cp)

Small subunit of ribosome

rps1, rps2, rps3, rps4 (× 2), rps7, rps12, rps13, rps14

Ribosomal RNAs

rrn5 (× 3), rrn18 (× 3), rrn26 (× 2)

Transfer RNAs

trnC-GCA (× 2, cp), trnD-GUC (× 2), trnE-UUC (× 3), trnF-GAA (cp), trnfM-CAU (× 4), trnH-GUG (cp), trnI-CAU, trnK-UUU, trnM-CAU (cp), trnN-GUU (cp), trnP-UGG (× 2), trnP-UGG (cp), trnQ-UUG, trnS-GCU, trnS-GGA (cp), trnS-UGA, trnV-GAC, trnW-CCA (cp), trnY-GUA

  1. The numbers in parentheses represent copy numbers of genes, and ‘cp’ represent the plastid-derived genes