Skip to main content

Table 3 Consistent SNPs filtered through different models across both the locations and years

From: Genetic diversity, population structure, and genome-wide association study for the flowering trait in a diverse panel of 428 moth bean (Vigna aconitifolia) accessions using genotyping by sequencing

Model

SNP ID

Alleles

Contig

Position

Location

FasTmrEMMA

SNP4779

T/A

65,980

8

B2021, J2019, J2022

FASTmrMLM

SNP3620

A/G

51,790

122

B2021, J2022

SNP4779

T/A

65,980

8

B2021, J2019 J2022

SNP6919

A/G

104,203

15

B2022, J2019, J2022

ISIS EM-BLASSO

SNP3620

A/G

51,790

122

B2021, J2019

SNP4779

T/A

65,980

8

B2021, J2019, J2022

SNP6919

A/G

104,203

15

B2022, J2019, J2022

mrMLM

SNP3620

A/G

51,790

122

B2021, J2019

SNP4779

T/A

65,980

8

B2021, J2019, J2022

SNP6919

A/G

104,203

15

B2022, J2019, J2022

Blink

SNP4779

T/A

65,980

8

B2021, J2019 J2022

SNP6919

A/G

104,203

15

B2022, J2019, J2022

FarmCPU

SNP3620

A/G

51,790

122

B2021, J2019

SNP4779

T/A

65,980

8

B2021, J2019 J2022

SNP6919

A/G

104,203

15

B2022, J2019, J2022

MLMM

SNP3620

A/G

51,790

122

B2021, J2019

SNP4779

T/A

65,980

8

B2021, J2019, J2022

SNP6919

A/G

104,203

15

B2022, J2019, J2022

  1. B Bikaner, J Jodhpur