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Table 2 Important candidate genes and functional annotations identified in GWAS

From: Combining GS-assisted GWAS and transcriptome analysis to mine candidate genes for nitrogen utilization efficiency in Populus cathayana

P. cathayana id

P. trichocarpa ida

Traitb

Gene description

Pca02G020350

Potri.002G214100

GEBV-PH

Phosphoenolpyruvate carboxylase

Pca03G006430

Potri.003G072600

GEBV-PH

Alanine aminotransferase 2

Pca04G007700

NA

GEBV-GD

Transcription factor MYB20

Pca04G010300

Potri.004G118400

GEBV-PH

Myb-like DNA-binding domain

Pca04G013090

Potri.004G140900

GEBV-PH

Cytochrome P450, abscisic acid 8'-hydroxylase 4

Pca05G015040

Potri.005G164700

GEBV-GD

Cryptochrome 1 family protein

Pca06G009220

Potri.006G102600

GEBV-PH, GEBV-GD

Transcription factor bhlh140

Pca06G021060

Potri.006G236200

GEBV-PH

Auxin-responsive protein IAA2

Pca12G011040

Potri.012G126500

GEBV-GD

NAC domain-containing protein 7

Pca13G013120

Potri.013G148600

GEBV-GD

Transcription factor MYB41

Pca17G004590

Potri.017G053500

GEBV-PH

Amino acid transport and metabolism

Pca18G003350

Potri.018G036400

GEBV-GD

Nitrate regulatory gene2 protein

  1. a Gene models are annotated using v3.1 of the P. trichocarpa genome
  2. b GWAS traits used to localize candidate genes