BMC Plant Biology

Table 2 Genome-wide distribution of SNPs and InDels

From: Identification of fertility restoration candidate genes from a restorer line R186 for Gossypium harknessii cytoplasmic male sterile cotton

Chr	Length (bp)	(2074A × R186) F₂
Chr	Length (bp)	No. SNPs	SNP density	No. InDels	InDel density
A01	118,174,371	2729	23.09	497	4.21
A02	108,272,889	1719	15.88	334	3.08
A03	111,586,618	26,462	237.14	3764	33.73
A04	87,703,368	1954	22.28	407	4.64
A05	110,845,161	114,496	1032.94	9734	87.82
A06	126,488,190	6497	51.36	1084	8.57
A07	96,598,283	14,246	147.48	1864	19.30
A08	125,056,055	149,600	1196.26	11,509	92.03
A09	83,216,487	7631	91.70	1141	13.71
A10	115,096,118	10,498	91.21	1543	13.41
A11	121,376,521	6658	54.85	1189	9.80
A12	107,588,319	8454	78.58	1374	12.77
A13	110,367,549	11,712	106.12	1546	14.01
D01	64,698,102	3622	55.98	622	9.61
D02	69,777,850	17,836	255.61	2560	36.69
D03	53,896,199	8845	164.11	1720	31.91
D04	56,935,404	3483	61.17	636	11.17
D05	63,929,679	318,616	4983.85	25,800	403.57
D06	65,459,843	12,059	184.22	2028	30.98
D07	58,417,686	18,442	315.69	2523	43.19
D08	69,080,421	26,922	389.72	3213	46.51
D09	52,000,373	8767	168.59	1395	26.83
D10	66,881,427	9471	141.61	1459	21.81
D11	71,358,197	3746	52.50	787	11.03
D12	61,693,100	9190	148.96	1630	26.42
D13	64,447,585	1746	27.09	358	5.55
Whole	2,240,945,795	805,401	359.40	80,717	36.02

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ISSN: 1471-2229

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