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Table 1 85 differential compounds (healthy vs SLCMV-infected groups) identified by UHPLC-HRMS/MS and annotated in KEGG pathway analysis. Total is the total number of detected compounds which matched in the pathway; Hits is the number of differential compounds in the pathway; Raw P is the original P value calculated in the enrichment analysis; Holm P is the P value adjusted by the Holm-Bonferroni method; FDR P is the P value adjusted using the false discovery rate; Impact is the pathway impact value calculated using pathway topology analysis

From: Metabolic profiles of Sri Lankan cassava mosaic virus-infected and healthy cassava (Manihot esculenta Crantz) cultivars with tolerance and susceptibility phenotypes

Pathways

KEGG pathway

Total

Expected

Hits

Raw p

log10 (p)

Holm adjust

FDR

Impact

Aminoacyl-tRNA biosynthesis

map00970

46

1.2097

10

9.7818E-08

7.0096

9.3905E-06

9.3905E-06

0.11111

Flavone and flavonol biosynthesis

map00944

10

0.26298

3

0.0017776

2.7502

0.16887

0.068052

0.7

Valine, leucine and isoleucine biosynthesis

map00290

22

0.57856

4

0.0021266

2.6723

0.1999

0.068052

0

Glyoxylate and dicarboxylate metabolism

map00630

29

0.76264

4

0.0060453

2.2186

0.56222

0.14509

0.0781

Alanine, aspartate and glutamate metabolism

map00250

22

0.57856

3

0.018329

1.7369

1

0.35191

0.32374

Flavonoid biosynthesis

map00941

47

1.236

4

0.032308

1.4907

1

0.51693

0.00425

Cyanoamino acid metabolism

ko00460

29

0.76264

3

0.038316

1.4166

1

0.52548

0

Glycine, serine and threonine metabolism

map00260

33

0.86784

3

0.053238

1.2738

1

0.60842

0.30168

Sulfur metabolism

map00920

15

0.39447

2

0.057039

1.2438

1

0.60842

0.03315

Valine, leucine and isoleucine degradation

map00280

37

0.97303

3

0.07057

1.1514

1

0.62395

0

Butanoate metabolism

map00650

17

0.44707

2

0.071494

1.1457

1

0.62395

0

Glucosinolate biosynthesis

map00966

65

1.7094

4

0.087535

1.0578

1

0.70028

0

Citrate cycle (TCA cycle)

map00020

20

0.52596

2

0.095105

1.0218

1

0.70231

0.15581

Phenylalanine, tyrosine and tryptophan biosynthesis

map00400

22

0.57856

2

0.11193

0.95106

1

0.74948

0.02152

Phenylpropanoid biosynthesis

map00940

46

1.2097

3

0.11745

0.93014

1

0.74948

0.07013

Biosynthesis of secondary metabolites—unclassified

map01110

5

0.13149

1

0.12491

0.90339

1

0.74948

1

Glutathione metabolism

map00480

26

0.68375

2

0.14761

0.83087

1

0.78936

0.06248

Isoquinoline alkaloid biosynthesis

map00950

6

0.15779

1

0.148

0.82973

1

0.78936

0.5

Tropane, piperidine and pyridine alkaloid biosynthesis

map00960

8

0.21038

1

0.19242

0.71575

1

0.97222

0

Arginine and proline metabolism

map00330

34

0.89413

2

0.22424

0.64929

1

1

0.07781

Phenylalanine metabolism

map00360

11

0.28928

1

0.25484

0.59373

1

1

0.47059

Ubiquinone and other terpenoid-quinone biosynthesis

map00130

38

0.99933

2

0.26382

0.5787

1

1

0.00097

Nitrogen metabolism

map00910

12

0.31558

1

0.27458

0.56133

1

1

0

Histidine metabolism

map00340

15

0.39447

1

0.3308

0.48043

1

1

0.04264

Tyrosine metabolism

map00350

16

0.42077

1

0.34858

0.4577

1

1

0.10811

Sphingolipid metabolism

map00600

17

0.44707

1

0.3659

0.43664

1

1

0

Ascorbate and aldarate metabolism

map00053

18

0.47336

1

0.38277

0.41707

1

1

0

Lysine degradation

map00310

18

0.47336

1

0.38277

0.41707

1

1

0

Arginine biosynthesis

map00220

18

0.47336

1

0.38277

0.41707

1

1

0.08544

Pentose phosphate pathway

map00030

19

0.49966

1

0.3992

0.39881

1

1

0

Propanoate metabolism

map00640

20

0.52596

1

0.4152

0.38174

1

1

0

Zeatin biosynthesis

map00908

21

0.55226

1

0.43079

0.36573

1

1

0

Starch and sucrose metabolism

map00500

22

0.57856

1

0.44598

0.35069

1

1

0.13619

Pantothenate and CoA biosynthesis

map00770

23

0.60486

1

0.46077

0.33652

1

1

0

Purine metabolism

map00230

63

1.6568

2

0.50037

0.30071

1

1

0.00126

Galactose metabolism

map00052

27

0.71005

1

0.51617

0.28721

1

1

0

Inositol phosphate metabolism

map00562

28

0.73635

1

0.52913

0.27644

1

1

0

Glycerophospholipid metabolism

map00564

37

0.97303

1

0.63153

0.19961

1

1

0.03075

Cysteine and methionine metabolism

map00270

46

1.2097

1

0.7121

0.14746

1

1

0

Porphyrin and chlorophyll metabolism

map00860

48

1.2623

1

0.72752

0.13815

1

1

0