Skip to main content

Table 5 Summary of the 32 genes, including Gene Ontology terms, from the major selective sweep, detected on the the scaffold VaccDscaff 12 

From: Genomic and evolutionary relationships among wild and cultivated blueberry species

SeqName

Annotation

Length

#Hits

e-Value

Arabidopsis homolog

augustus_masked-VaccDscaff12-processed-gene-172.10

Protein MAINTENANCE OF MERISTEMS-like

3737

10

1.83E-34

AT2G25010.1

augustus_masked-VaccDscaff12-processed-gene-173.0

PREDICTED: uncharacterized protein LOC107810502

1137

10

1.28E-11

---NA---

maker-VaccDscaff12-snap-gene-173.17

DNA topoisomerase 2

245

10

4.38E-33

AT3G23890.2

maker-VaccDscaff12-snap-gene-173.19

DNA topoisomerase 2-like

729

10

9.11E-13

AT3G23890.2

maker-VaccDscaff12-snap-gene-173.16

DNA topoisomerase 2

245

10

4.38E-33

AT3G23890.2

maker-VaccDscaff12-snap-gene-173.18

DNA topoisomerase 2-like

239

10

1.12E-15

AT3G23890.2

maker-VaccDscaff12-snap-gene-173.20

---NA---

1007

  

---NA---

maker-VaccDscaff12-augustus-gene-173.14

---NA---

1900

  

---NA---

maker-VaccDscaff12-augustus-gene-174.17

DNA topoisomerase 2-like

408

10

3.24E-15

AT3G23890.2

augustus_masked-VaccDscaff12-processed-gene-174.7

Callose synthase 10 isoform X2

18,273

10

1.05E-27

AT2G36850.1

maker-VaccDscaff12-snap-gene-174.22

---NA---

5469

  

---NA---

maker-VaccDscaff12-snap-gene-174.23

---NA---

5818

  

---NA---

maker-VaccDscaff12-snap-gene-175.34

Callose synthase 10 isoform X2

8520

10

2.84E-26

AT2G36850.1

maker-VaccDscaff12-snap-gene-175.35

Callose synthase 9

9063

10

6.19E-07

AT2G36850.1

maker-VaccDscaff12-snap-gene-176.26

Uncharacterized protein LOC109834839

7786

10

2.38E-25

AT5G18880.1

augustus_masked-VaccDscaff12-processed-gene-176.2

Uncharacterized protein LOC110900598

3546

10

1.43E-118

AT3G24255.1

augustus_masked-VaccDscaff12-processed-gene-177.2

E3 ubiquitin-protein ligase Praja-2

2090

10

4.96E-24

AT3G02340.1

snap_masked-VaccDscaff12-processed-gene-177.21

Nitrate regulatory gene2 protein isoform X2

7397

10

2.31E-22

AT5G25590.1

augustus_masked-VaccDscaff12-processed-gene-177.4

Uncharacterized protein LOC110779242

2260

10

4.47E-58

AT1G43760.1

maker-VaccDscaff12-snap-gene-178.40

E3 ubiquitin-protein ligase Praja-2-like

379

10

2.21E-28

AT3G02340.1

maker-VaccDscaff12-snap-gene-178.38

---NA---

1070

  

---NA---

maker-VaccDscaff12-augustus-gene-178.30

Gamma-secretase subunit APH1-like

2021

10

9.72E-14

AT2G31440.1

maker-VaccDscaff12-snap-gene-178.36

Interaptin

2111

10

1.60E-43

AT3G55060.1

augustus_masked-VaccDscaff12-processed-gene-178.1

Interaptin

510

10

1.48E-38

AT3G55060.1

augustus_masked-VaccDscaff12-processed-gene-178.2

Golgin subfamily A member 4

1266

10

3.61E-58

AT3G55060.1

augustus_masked-VaccDscaff12-processed-gene-178.4

DNA topoisomerase 2

363

10

2.63E-37

AT3G23890.1

snap_masked-VaccDscaff12-processed-gene-178.19

Protein MOR1 isoform X1

7003

10

2.52E-07

AT2G42740.1

maker-VaccDscaff12-snap-gene-179.34

Gamma-secretase subunit APH1-like

1952

10

7.83E-14

AT2G31440.1

augustus_masked-VaccDscaff12-processed-gene-179.1

E3 ubiquitin-protein ligase Praja-2-like

9338

10

1.58E-22

AT3G02340.1

maker-VaccDscaff12-snap-gene-179.36

Interaptin

2010

10

4.80E-38

AT3G55060.1

augustus_masked-VaccDscaff12-processed-gene-179.3

Interaptin

510

10

4.67E-40

AT3G55060.1

augustus_masked-VaccDscaff12-processed-gene-179.4

Golgin subfamily A member 4

1335

10

6.75E-58

AT3G55060.1