Table 6 Annotation of non-synonymous SNP/InDel variations identified in homologues of plant weight/size genes within the physical interval of the stable major QTL clusters of qClu-1-3 and qClu-1-5
From: QTL mapping and candidate gene analysis for yield and grain weight/size in Tartary buckwheat
QTL cluster | Chr | Homologues of grain weight/size related genes of Tartary buckwheat | Plant grain weight/size genes | Oritation | Transcript ID | Position bp | Exon | Mutation/Nucleotide | Mutation/Protein |
|---|---|---|---|---|---|---|---|---|---|
qClu-1-3 | Ft1 | FtPinG0001423200.01 | BRI1 | - | FtPinG0001423200.01.T01 | 6,599,812 | exon1: | c.1903-1906del | p.W635fs |
qClu-1-3 | Ft1 | FtPinG0002490200.01 | DASH | +  | FtPinG0002490200.01.T01 | 6,985,415 | exon1 | c.C490G | p.H164D |
qClu-1-3 | Ft1 | FtPinG0002488900.01 | AGB1 | - | FtPinG0002488900.01.T01 | 7,033,486 | exon5 | c.T635C; c.T221C | p.I212T; p.I74T |
qClu-1-3 | Ft1 | FtPinG0002458000.01 | TGW6 | +  | FtPinG0002458000.01.T01 | 8,026,188 | exon3 | c.C697G | p.Q233E |
qClu-1-5 | Ft1 | FtPinG0001018400.01 | MKK4 | - | FtPinG0001018400.01.T01 | 23,023,413 | exon1 | c.A1311T | p.R437S |
qClu-1-5 | Ft1 | FtPinG0001028600.01 | ANT | - | FtPinG0001028600.01.T01 | 23,484,040 | exon2 | c.G521A | p.G174D |