Table 1 Summary of alignment of T. chinensis RNA-seq data
Treatments | Replicates | Total reads (millions) | Total aligned reads (millions) | Uniquely aligned reads (millions) | Multiple aligned reads (millions) | Transcripts with TPM > 1 |
|---|---|---|---|---|---|---|
LL | 1 | 26.48 | 22.75 (85.90%) | 21.63 (81.69%) | 1.11 (4.20%) | 19,449 |
LL | 2 | 25.56 | 22.26 (87.08%) | 19.27 (75.38%) | 1.16 (4.54%) | 19,552 |
LL | 3 | 27.26 | 23.47 (86.10%) | 22.31 (81.85%) | 1.16 (4.25%) | 19,575 |
ML | 1 | 22.75 | 19.56 (85.95%) | 18.50 (81.30%) | 1.06 (4.65%) | 19,321 |
ML | 2 | 25.82 | 22.17 (85.87%) | 21.00 (81.21%) | 1.20 (4.66%) | 19,369 |
ML | 3 | 26.27 | 25.50 (85.65%) | 21.29 (81.05%) | 1.21 (4.60%) | 19,516 |
HL | 1 | 24.29 | 20.59 (84.77%) | 19.37 (79.73%) | 1.22 (5.04%) | 19,320 |
HL | 2 | 24.91 | 21.06 (84.54%) | 19.80 (79.49%) | 1.26 (5.05%) | 19,562 |
HL | 3 | 26.14 | 21.98 (84.11%) | 20.47 (78.30%) | 1.52 (5.82%) | 19,639 |