Fig. 1

SNP screening and in silico simulation. A Distribution and statistics of the 1662 SNPs. Tracks toward the center: a, marker density; b, polymorphism information content (PIC); c, heterozygosity rate; d, minor allele frequency (MAF); e, gene diversity. The 51 successfully designed KASP markers were labeled. B Statistics of the six variant types of the 1662 SNPs. C In silico simulation of SNP marker discernibility in 153 core germplasm samples